mkrn2 (Danio rerio)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDARG00000007630 T02433_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000016210 CCCH ZF 3 28
ENSDARP00000016210 CCCH ZF 34 57
ENSDARP00000016210 CCCH ZF 166 190
ENSDARP00000016210 CCCH ZF 322 348

Links

Other CCCH ZF family RBPs
Other Danio rerio RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN2 Gasterosteus aculeatus ENSGACG00000003396 N 0.794
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.765
ABR68861 Xenopus laevis ABR68861 N 0.757
AAI06425 Xenopus laevis AAI06425 N 0.757
B0F0H3 Xenopus laevis B0F0H3 N 0.757
Mkrn2 Rattus norvegicus ENSRNOG00000009176 N 0.755
MKRN2 Oryzias latipes ENSORLG00000009824 N 0.748
ENSPPYG00000013387 Pongo pygmaeus ENSPPYG00000013387 N 0.748
MKRN2 Homo sapiens ENSG00000075975 N 0.745
NP_001072101.1 Takifugu rubripes ENSTRUG00000003156 N 0.745
MKRN2 Pan troglodytes ENSPTRG00000014634 N 0.745
MKRN2 Gorilla gorilla ENSGGOG00000000429 N 0.745
MKRN2 Macaca mulatta ENSMMUG00000009536 N 0.745
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.745
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.738
MKRN2 Canis familiaris ENSCAFG00000004967 N 0.738
MKRN2 Vicugna pacos ENSVPAG00000011064 N 0.738
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.738
MKRN2 Anolis carolinensis ENSACAG00000013310 N 0.728
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.728
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.728
MKRN2 Tetraodon nigroviridis ENSTNIG00000004883 N 0.725
Q8UWH3_CHICK Gallus gallus ENSGALG00000004991 N 0.712
MKRN2 Taeniopygia guttata ENSTGUG00000004017 N 0.709