ZGPAT (Spermophilus tridecemlineatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSSTOG00000011986 T03415_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000010754 CCCH ZF 52 76

Links

Other CCCH ZF family RBPs
Other Spermophilus tridecemlineatus RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH84897 Xenopus laevis AAH84897 N 0.731
Ame_R014267 Ailuropoda melanoleuca Ame_R014267 N 0.880
ZGPAT_BOVIN Bos taurus ENSBTAG00000007498 N 0.840
ZGPAT Canis familiaris ENSCAFG00000013056 N 0.960
ZGPAT Callithrix jacchus ENSCJAG00000010398 N 0.920
ZGPAT Cavia porcellus ENSCPOG00000014427 N 0.920
ZGPAT Dasypus novemcinctus ENSDNOG00000025874 N 0.920
ZGPAT Felis catus ENSFCAG00000001173 N 0.880
ZGPAT Homo sapiens ENSG00000197114 N 0.920
ZGPAT Gorilla gorilla ENSGGOG00000004801 N 0.920
LOC719499 Macaca mulatta ENSMMUG00000000171 N 0.920
ZGPAT Monodelphis domestica ENSMODG00000017016 N 0.920
Zgpat Mus musculus ENSMUSG00000027582 N 0.920
ZGPAT Ornithorhynchus anatinus ENSOANG00000004932 N 0.920
ZGPAT Otolemur garnettii ENSOGAG00000004502 N 0.920
ZGPAT Procavia capensis ENSPCAG00000001883 N 0.880
ENSPPYG00000011246 Pongo pygmaeus ENSPPYG00000011246 N 0.920
ZGPAT Pan troglodytes ENSPTRG00000013750 N 0.920
ZGPAT Pteropus vampyrus ENSPVAG00000013489 N 0.840
Lime1 Rattus norvegicus ENSRNOG00000014235 N 0.920
ZGPAT Tetraodon nigroviridis ENSTNIG00000004165 N 0.840
ZGPAT Takifugu rubripes ENSTRUG00000010488 N 0.808
ZGPAT Tursiops truncatus ENSTTRG00000012223 N 0.920
Q5U4Z3 Xenopus laevis Q5U4Z3 N 0.731