XP_001196290.1 (Strongylocentrotus purpuratus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 XP_001196290.1 T06617_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001196290.1 CCCH ZF 177 203

Links

Other CCCH ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

243 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.000
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.000
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.000
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.000
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.000
LOC100053264 Equus caballus ENSECAG00000026873 I 0.000
SRSF5 Felis catus ENSFCAG00000008848 I 0.000
SRSF5 Homo sapiens ENSG00000100650 D 0.000
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.000
SRSF5 Microcebus murinus ENSMICG00000009661 I 0.000
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.000
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.000
Srsf5 Mus musculus ENSMUSG00000021134 I 0.000
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.000
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.000
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.000
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.000
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.000
SRSF5 Pteropus vampyrus ENSPVAG00000009828 I 0.000
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.000
SRSF5 Sorex araneus ENSSARG00000001059 I 0.000
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.000
SRSF5 Tupaia belangeri ENSTBEG00000001972 I 0.000
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.000
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.000
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.000
estExt_fgenesh2_pg.C_690104 Branchiostoma floridae estExt_fgenesh2_pg.C_690104 N 0.000