SRSF5 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000009661 T38534_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF5
M357_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
985_9037021 		0.705
SRSF5
M356_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
984_9037021 		0.705
SRSF5
M355_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
983_9037021 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000008793 RRM 6 68
ENSMICP00000008793 RRM 110 175

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.907
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.907
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.907
LOC100053264 Equus caballus ENSECAG00000026873 I 0.907
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.907
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.907
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.907
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.907
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.907
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.907
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.907
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.907
SRSF5 Felis catus ENSFCAG00000008848 I 0.907
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.907
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.907
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.907
Srsf5 Mus musculus ENSMUSG00000021134 I 0.907
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.907
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.907
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.907
SRSF5 Homo sapiens ENSG00000100650 D 0.907
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.907
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.899
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.899
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.899
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.899
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.899
SRSF5 Tupaia belangeri ENSTBEG00000001972 I 0.891
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.884
Q5ZLF9_CHICK Gallus gallus ENSGALG00000009421 I 0.876
SRSF5 Ornithorhynchus anatinus ENSOANG00000013336 I 0.845
srsf5b Danio rerio ENSDARG00000027734 I 0.837
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.829
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.829
SRSF5 Sorex araneus ENSSARG00000001059 I 0.791
SRSF5 Pteropus vampyrus ENSPVAG00000009828 I 0.783
SRSF5 Gasterosteus aculeatus ENSGACG00000007834 I 0.744
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.744
srsf5a Danio rerio ENSDARG00000029818 I 0.736
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.736
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.729
Srsf5 Dipodomys ordii ENSDORG00000003989 I 0.721
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.721
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.713
AAH71160 Xenopus laevis AAH71160 I 0.713
AAH44085 Xenopus laevis AAH44085 I 0.713
SRSF5 Dasypus novemcinctus ENSDNOG00000006160 I 0.705
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.705