SRSF5 (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000009828 T40916_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF5
M357_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
985_9037021 		0.773
SRSF5
M356_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
984_9037021 		0.773
SRSF5
M355_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
983_9037021 		0.773
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000009263 RRM 6 67
ENSPVAP00000009263 RRM 119 175

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF5 Sorex araneus ENSSARG00000001059 I 0.950
Srsf5 Dipodomys ordii ENSDORG00000003989 I 0.924
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.876
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.876
SRSF5 Homo sapiens ENSG00000100650 D 0.876
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.876
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.876
SRSF5 Felis catus ENSFCAG00000008848 I 0.876
Srsf5 Mus musculus ENSMUSG00000021134 I 0.876
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.876
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.876
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.876
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.876
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.876
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.876
LOC100053264 Equus caballus ENSECAG00000026873 I 0.876
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.876
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.876
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.876
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.876
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.876
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.876
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.876
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.876
SRSF5 Gasterosteus aculeatus ENSGACG00000007834 I 0.875
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.868
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.868
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.868
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.868
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.868
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.853
SRSF5 Tupaia belangeri ENSTBEG00000001972 I 0.845
Q5ZLF9_CHICK Gallus gallus ENSGALG00000009421 I 0.845
SRSF5 Ornithorhynchus anatinus ENSOANG00000013336 I 0.814
srsf5b Danio rerio ENSDARG00000027734 I 0.806
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.798
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.798
SRSF5 Microcebus murinus ENSMICG00000009661 I 0.783
SRSF5 Macropus eugenii ENSMEUG00000001521 N 0.773
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.750
SRSF5 Dasypus novemcinctus ENSDNOG00000006160 I 0.733
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.705