Cucsa.317370 (Cucumis sativus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		Cucsa.317370 T07521_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.317370.1 RRM 9 79
Cucsa.317370.1 CCHC ZF 120 137
Cucsa.317370.2 RRM 9 79
Cucsa.317370.2 CCHC ZF 120 137

Links

Other CCHC ZF,RRM family RBPs
Other Cucumis sativus RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP005641 Anopheles gambiae AGAP005641 N 0.000
CG9705 Drosophila melanogaster FBgn0036661 N 0.000
GA21978-RA Drosophila pseudoobscura FBgn0081963 N 0.000
GF23931 Drosophila ananassae FBgn0100925 N 0.000
GG13577 Drosophila erecta FBgn0105847 N 0.000
GH16224 Drosophila grimshawi FBgn0123695 N 0.000
GI13370 Drosophila mojavensis FBgn0136127 N 0.000
GL20690 Drosophila persimilis FBgn0158285 N 0.000
GD14664 Drosophila simulans FBgn0186342 N 0.000
GJ13199 Drosophila virilis FBgn0200425 N 0.000
GK16809 Drosophila willistoni FBgn0218809 N 0.000
GE19874 Drosophila yakuba FBgn0237204 N 0.000
PHUM557470 Pediculus humanus PHUM557470 N 0.000