CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PHUM557470
(
Pediculus humanus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
PHUM557470
T17135_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM557470-PA
CSD
47
114
IEKGTVKMFCREKGHGFITSNRTGEDIFVHISDIEGEYVPLPGDEVEYRLCPIPPKFEKTQAVHVNII
Links
Other
CSD
family RBPs
Other
Pediculus humanus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA005287
Bombyx mori
BGIBMGA005287
N
0.765
AGAP005641
Anopheles gambiae
AGAP005641
N
0.765
CpipJ_CPIJ008535
Culex pipiens
CpipJ_CPIJ008535
N
0.735
CPIJ008535
Culex quinquefasciatus
CPIJ008535
N
0.735
AAEL009235
Aedes aegypti
AAEL009235
N
0.718
GD14664
Drosophila simulans
FBgn0186342
N
0.706
GM25657
Drosophila sechellia
FBgn0180514
N
0.706
GJ13199
Drosophila virilis
FBgn0200425
N
0.706
CG9705
Drosophila melanogaster
FBgn0036661
N
0.706
GH16224
Drosophila grimshawi
FBgn0123695
N
0.706
GI13370
Drosophila mojavensis
FBgn0136127
N
0.706