CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GH16224
(
Drosophila grimshawi
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
FBgn0123695
T17085_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0150130
CSD
54
121
VVSGVVKSFSRTKGHGFITPNGGGEDVFCHVSDIEGEYVPMEGDEVKYRLCAIPPKFEKHQAVHVHIS
Links
Other
CSD
family RBPs
Other
Drosophila grimshawi
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ13199
Drosophila virilis
FBgn0200425
N
0.956
GI13370
Drosophila mojavensis
FBgn0136127
N
0.912
CG9705
Drosophila melanogaster
FBgn0036661
N
0.912
GD14664
Drosophila simulans
FBgn0186342
N
0.912
GM25657
Drosophila sechellia
FBgn0180514
N
0.912
GG13577
Drosophila erecta
FBgn0105847
N
0.897
GF23931
Drosophila ananassae
FBgn0100925
N
0.897
GE19874
Drosophila yakuba
FBgn0237204
N
0.897
GK16809
Drosophila willistoni
FBgn0218809
N
0.897
GL20690
Drosophila persimilis
FBgn0158285
N
0.882
GA21978-RA
Drosophila pseudoobscura
FBgn0081963
N
0.882
AGAP005641
Anopheles gambiae
AGAP005641
N
0.721
PHUM557470
Pediculus humanus
PHUM557470
N
0.706
AAH84399
Xenopus laevis
AAH84399
N
0.706