CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_09518
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_09518
T08448_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_09518T0
CCHC ZF
277
294
GQCFRCEKKGHIARECPD
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.722
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.722
PGTG_05307
Puccinia graminis
PGTG_05307
N
0.722
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.778
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.722
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.722
PGTG_12045
Puccinia graminis
PGTG_12045
N
0.722
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.722
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.722
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.722
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.722
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.722
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.722
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.722
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.722
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.722
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.722
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.722
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.722
PTTG_08960
Puccinia triticina
PTTG_08960
N
0.722
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.778
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.722
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.722
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.722
PTTG_10278
Puccinia triticina
PTTG_10278
N
0.944
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.778
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.778
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.722