PGTG_05408 (Puccinia graminis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PGTG_05408 T08139_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_05408 CCHC ZF 270 287

Links

Other CCHC ZF family RBPs
Other Puccinia graminis RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_15116 Puccinia graminis PGTG_15116 N 1.000
PGTG_20442 Puccinia graminis PGTG_20442 N 1.000
PGTG_03348 Puccinia graminis PGTG_03348 N 1.000
PGTG_03172 Puccinia graminis PGTG_03172 N 1.000
PGTG_09834 Puccinia graminis PGTG_09834 N 1.000
PGTG_18613 Puccinia graminis PGTG_18613 N 1.000
PGTG_05307 Puccinia graminis PGTG_05307 N 0.944
PGTG_12045 Puccinia graminis PGTG_12045 N 0.944
PGTG_16335 Puccinia graminis PGTG_16335 N 0.944
PGTG_12646 Puccinia graminis PGTG_12646 N 0.944
PGTG_14567 Puccinia graminis PGTG_14567 N 0.889
PGTG_05406 Puccinia graminis PGTG_05406 N 0.889
PTTG_10552 Puccinia triticina PTTG_10552 N 0.833
PTTG_11068 Puccinia triticina PTTG_11068 N 0.833
PTTG_11563 Puccinia triticina PTTG_11563 N 0.833
PTTG_10451 Puccinia triticina PTTG_10451 N 0.778
Genemark.2570_g Serpula lacrymans Genemark.2570_g N 0.778
PTTG_10713 Puccinia triticina PTTG_10713 N 0.778
PTTG_10809 Puccinia triticina PTTG_10809 N 0.778
PTTG_11278 Puccinia triticina PTTG_11278 N 0.778
PTTG_09789 Puccinia triticina PTTG_09789 N 0.778
PTTG_07469 Puccinia triticina PTTG_07469 N 0.778
PTTG_10278 Puccinia triticina PTTG_10278 N 0.778
PTTG_08330 Puccinia triticina PTTG_08330 N 0.778
PTTG_01306 Puccinia triticina PTTG_01306 N 0.778
PTTG_07033 Puccinia triticina PTTG_07033 N 0.778
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.722
PTTG_06752 Puccinia triticina PTTG_06752 N 0.722
PTTG_03874 Puccinia triticina PTTG_03874 N 0.722
PTTG_04497 Puccinia triticina PTTG_04497 N 0.722
PTTG_11299 Puccinia triticina PTTG_11299 N 0.722
PTTG_10751 Puccinia triticina PTTG_10751 N 0.722
PTTG_09518 Puccinia triticina PTTG_09518 N 0.722
PTTG_08777 Puccinia triticina PTTG_08777 N 0.722
PTTG_11057 Puccinia triticina PTTG_11057 N 0.722
PTTG_08665 Puccinia triticina PTTG_08665 N 0.722
PTTG_11462 Puccinia triticina PTTG_11462 N 0.722