CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_08665
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_08665
T08430_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_08665T0
CCHC ZF
272
289
GLCFRCGGKGHISRECPE
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
56 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.944
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.889
PTTG_06885
Puccinia triticina
PTTG_06885
N
0.833
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.833
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.778
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.778
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.778
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.778
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.778
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.778
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.778
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.778
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.778
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.778
PTTG_08372
Puccinia triticina
PTTG_08372
N
0.778
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.778
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.778
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.722
PTTG_03611
Puccinia triticina
PTTG_03611
N
0.722
PTTG_03581
Puccinia triticina
PTTG_03581
N
0.722
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.722
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.722
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.722
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.722
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.722
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.722
PTTG_05245
Puccinia triticina
PTTG_05245
N
0.722
PTTG_05279
Puccinia triticina
PTTG_05279
N
0.722
PTTG_05127
Puccinia triticina
PTTG_05127
N
0.722
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.722
PTTG_08329
Puccinia triticina
PTTG_08329
N
0.722
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.722
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.722
ENSGACG00000020110
Gasterosteus aculeatus
ENSGACG00000020110
N
0.722
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.722
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.722
PTTG_10645
Puccinia triticina
PTTG_10645
N
0.722
PTTG_10688
Puccinia triticina
PTTG_10688
N
0.722
PTTG_10004
Puccinia triticina
PTTG_10004
N
0.722
PTTG_09697
Puccinia triticina
PTTG_09697
N
0.722
PTTG_08960
Puccinia triticina
PTTG_08960
N
0.722
PTTG_08980
Puccinia triticina
PTTG_08980
N
0.722
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.722
PTTG_09518
Puccinia triticina
PTTG_09518
N
0.722
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.722
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.722
CHGG_00209
Chaetomium globosum
CHGG_00209
N
0.722
CHGG_02707
Chaetomium globosum
CHGG_02707
N
0.722
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.722
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.722
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.722
ENSGACG00000013495
Gasterosteus aculeatus
ENSGACG00000013495
N
0.722
PTTG_11299
Puccinia triticina
PTTG_11299
N
0.722
BRADI3G11560
Brachypodium distachyon
BRADI3G11560
N
0.722
ENSGACG00000001944
Gasterosteus aculeatus
ENSGACG00000001944
N
0.722
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.722