CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EAT76727.2
(
Phaeosphaeria nodorum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
EAT76727.2
T15047_0.6
NCBI (2013-Jan-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAT76727.2
CCHC ZF
565
582
RTCYACGQVGHQKRECPT
Links
Other
CCHC ZF
family RBPs
Other
Phaeosphaeria nodorum
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSTUMT00000045001
Tuber melanosporum
GSTUMT00000045001
N
0.000
GSTUMT00000433001
Tuber melanosporum
GSTUMT00000433001
N
0.000
GSTUMT00000525001
Tuber melanosporum
GSTUMT00000525001
N
0.000
GSTUMT00001373001
Tuber melanosporum
GSTUMT00001373001
N
0.000
GSTUMT00002974001
Tuber melanosporum
GSTUMT00002974001
N
0.000
GSTUMT00007590001
Tuber melanosporum
GSTUMT00007590001
N
0.000
GSTUMT00008145001
Tuber melanosporum
GSTUMT00008145001
N
0.000
GSTUMT00008340001
Tuber melanosporum
GSTUMT00008340001
N
0.000
GSTUMT00009478001
Tuber melanosporum
GSTUMT00009478001
N
0.000
GSTUMT00009895001
Tuber melanosporum
GSTUMT00009895001
N
0.000
GSTUMT00010489001
Tuber melanosporum
GSTUMT00010489001
N
0.000
GSTUMT00010588001
Tuber melanosporum
GSTUMT00010588001
N
0.000
LOC_Os03g20690
Oryza sativa
LOC_Os03g20690
N
0.000
LOC_Os04g04120
Oryza sativa
LOC_Os04g04120
N
0.000
LOC_Os04g06220
Oryza sativa
LOC_Os04g06220
N
0.000
LOC_Os05g49600
Oryza sativa
LOC_Os05g49600
N
0.000
LOC_Os07g31590
Oryza sativa
LOC_Os07g31590
N
0.000
LOC_Os07g41110
Oryza sativa
LOC_Os07g41110
N
0.000
LOC_Os12g39190
Oryza sativa
LOC_Os12g39190
N
0.000
MDP0000649942
Malus x domestica
MDP0000649942
N
0.000