MDP0000649942 (Malus x domestica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 MDP0000649942 T16077_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000649942 CCHC ZF 234 251

Links

Other CCHC ZF family RBPs
Other Malus x domestica RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000438504 Malus x domestica MDP0000438504 N 0.889
GSTUMT00009478001 Tuber melanosporum GSTUMT00009478001 N 0.722
GSTUMT00010489001 Tuber melanosporum GSTUMT00010489001 N 0.722
GSTUMT00002974001 Tuber melanosporum GSTUMT00002974001 N 0.722
GSTUMT00002439001 Tuber melanosporum GSTUMT00002439001 N 0.722
BRADI4G42725 Brachypodium distachyon BRADI4G42725 N 0.722
estExt_fgenesh2_pg.C_780005 Branchiostoma floridae estExt_fgenesh2_pg.C_780005 N 0.722
GSTUMT00000433001 Tuber melanosporum GSTUMT00000433001 N 0.722
BRADI3G23364 Brachypodium distachyon BRADI3G23364 N 0.722