CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSG00000249536
(
Homo sapiens
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSG00000249536
T18817_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
1.000
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000424614
KH
1697
1759
SKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLI
Links
Other
KH
family RBPs
Other
Homo sapiens
RBPs
71 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB08315.1
Alternaria brassicicola
AB08315.1
N
0.000
ADR062W
Ashbya gossypii
ADR062W
N
0.000
ANIA_03447
Aspergillus nidulans
CADANIAG00009587
N
0.000
Cd36_85970
Candida dubliniensis
Cd36_85970
N
0.000
CHGG_00049
Chaetomium globosum
CHGG_00049
N
0.000
CLUG_02022
Candida lusitaniae
CLUG_02022
N
0.000
CTRG_02259
Candida tropicalis
CTRG_02259
N
0.000
EAT89389.2
Phaeosphaeria nodorum
EAT89389.2
N
0.000
estExt_fgenesh1_kg.C_60003
Myceliophthora thermophila
estExt_fgenesh1_kg.C_60003
N
0.000
estExt_fgenesh1_pg.C_160206
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_160206
N
0.000
estExt_fgenesh5_pg.C_100355
Trichoderma reesei
estExt_fgenesh5_pg.C_100355
N
0.000
estExt_Genewise1.C_110035
Neurospora tetrasperma
estExt_Genewise1.C_110035
N
0.000
estExt_Genewise1.C_60695
Trichoderma atroviride
estExt_Genewise1.C_60695
N
0.000
estExt_Genewise1.C_81229
Thielavia terrestris
estExt_Genewise1.C_81229
N
0.000
estExt_Genewise1Plus.C_130028
Neurospora discreta
estExt_Genewise1Plus.C_130028
N
0.000
e_gw1.29.29.1
Trichoderma virens
e_gw1.29.29.1
N
0.000
e_gwh1.2.1.2495.1
Pichia stipitis
e_gwh1.2.1.2495.1
N
0.000
FOXG_04082
Fusarium oxysporum
FOXG_04082
N
0.000
FVEG_07196
Fusarium verticillioides
FVEG_07196
N
0.000
GLRG_01727
Colletotrichum graminicola
GLRG_01727
N
0.000
GSTUMT00003772001
Tuber melanosporum
GSTUMT00003772001
N
0.000
gw1.2.2109.1
Mucor circinelloides
gw1.2.2109.1
N
0.000
gw1.28.197.1
Nectria haematococca
gw1.28.197.1
N
0.000
MGG_03480
Magnaporthe oryzae
MGG_03480
N
0.000
NCU05007
Neurospora crassa
NCU05007
N
0.000
orf19.7385
Candida albicans
orf19.7385
N
0.000
Pa_5_7490
Podospora anserina
Pa_5_7490
N
0.000
PTRG_01963
Pyrenophora tritici repentis
PTRG_01963
N
0.000
SAKL0H10846g
Lachancea kluyveri
SAKL0H10846g
N
0.000
Scas_Contig567.6
Saccharomyces castellii
Scas_Contig567.6
N
0.000
SJAG_01535
Schizosaccharomyces japonicus
SJAG_01535
N
0.000
SNOG_02658
Stagonospora nodorum
SNOG_02658
N
0.000
SOCG_02788
Schizosaccharomyces octosporus
SOCG_02788
N
0.000
cps3
Schizosaccharomyces pombe
SPAC3A11.02
N
0.000
SPCC1739.01
Schizosaccharomyces pombe
SPCC1739.01
N
0.000
SPOG_02388
Schizosaccharomyces cryophilus
SPOG_02388
N
0.000
VDAG_09556
Verticillium dahliae
VDAG_09556
N
0.000
VDBG_09822
Verticillium albo atrum
VDBG_09822
N
0.000
XP_002493509.1
Pichia pastoris
XP_002493509.1
N
0.000
YALI0B12540g
Yarrowia lipolytica
YALI0B12540g
N
0.000