CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL17775
(
Drosophila persimilis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0155378
T19923_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0181882
KH
109
154
GESKRICQQITKETGAQIEIVSGKNQSLTFLIKGKQSELLDARRKI
FBpp0181882
KH
163
223
SRQVTVPREHYRVILGKGGQRLRDLERLTSTRINIPSQGDESEFITIAGTKEGIEKAEQEI
FBpp0181882
KH
235
295
SDRTTIPKIYHPFIVGPYSENLNKLQEETGAKINVPPQQVQKDEIIISGEKDAVAAAKAKV
FBpp0181882
KH
308
368
TVSVEVAKPQHRYVIGPKGSTIAEILQLTGVSVEMPPNDSTLETITLRGPQVALGNALTVV
FBpp0181882
KH
377
433
SVEINAPHWIHKYVIGRKGANMKQLEEDCPNVNVNCLEDKIKLEGDPENVDKAISYL
FBpp0181882
KH
446
505
YEVMTVNPSYYKHIIGKAGSNVNRLKDELKVNINIEEREGQNNIRIEGPKEGVRLAQLEL
FBpp0181882
KH
517
578
SKDVIIDRRLHRSIIGAKGEKIREVKDRYRQVTITIPTPQENTDIVKLRGPKEDVDKCHKDL
FBpp0181882
KH
591
651
IIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEAKERI
FBpp0181882
KH
663
724
SEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDSKSDKVTIRGPKDDVEKAKGQL
FBpp0181882
KH
737
798
TAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDTDKEVITIIGKEDSVKKAKEQL
FBpp0181882
KH
810
871
EGEVAVDPKHHKYFVAKRGLILHRIAEENGGVMISFPRAGTNSDKVTLKGAKDCIEAAKQRI
FBpp0181882
KH
883
979
TIEVIIPQRQHRTIMGARGFKVQQVTSEFDVQIKFPDRDATDPVEGLTNGGLNGEGQEGEAAEQSSGAVDGAEPVRQCDVIRITGRIDKCEAAKQAL
FBpp0181882
KH
986
1046
EEELSVPFDLHRTIIGPRGANVRQFMSKHDVHVELPPSELKSDIIKVSGTPAHVAEAKEAL
FBpp0181882
KH
1066
1127
VLQLDVDQEYHSKLIGRHGAVINKLRADHDVNISLPKRDDPNQRIISITGYQAKAEAARDAI
FBpp0181882
KH
1131
1164
VDIKFPSSDDAQNNPNAVTIIGKEEDVENAKDVL
Links
Other
KH
family RBPs
Other
Drosophila persimilis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Dp1
Drosophila melanogaster
FBgn0027835
N
0.875
GA18708-RA
Drosophila pseudoobscura
FBgn0078708
N
0.968
GF12176
Drosophila ananassae
FBgn0089215
N
0.904
GG21892
Drosophila erecta
FBgn0114070
N
0.872
GH21672
Drosophila grimshawi
FBgn0129133
N
0.858
GI20125
Drosophila mojavensis
FBgn0142861
N
0.885
GM21884
Drosophila sechellia
FBgn0176761
N
0.870
GD11380
Drosophila simulans
FBgn0183129
N
0.877
GJ19895
Drosophila virilis
FBgn0207037
N
0.887
GK22993
Drosophila willistoni
FBgn0224955
N
0.899
GE11968
Drosophila yakuba
FBgn0229746
N
0.878