CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK22993
(
Drosophila willistoni
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0224955
T20028_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0252136
KH
119
164
GESKRICQQITKETGAQIEIVSNKNQSLTFLIKGKHSELLDARRKI
FBpp0252136
KH
173
233
SRQLTIPREHYRVILGKGGQRLRDLERSTSTRINIPSQNDESEFITIAGTKEGIEKAEQEI
FBpp0252136
KH
245
305
SDRFSVPKIYHPFIVGPYNENLNKLQEETGAKINVPPQQVQKDEIIISGEKDAVAAAKAKV
FBpp0252136
KH
318
378
TVSVEVAKPQHRYVIGPKGSTIAEILQLTGVSVEMPPNDSTSETITLRGPQVALGNALTVV
FBpp0252136
KH
387
443
SVEIDAPHWIHKYVIGRKGANMKQLEENCPNVNVNCLEDLIKLEGDPENVDKAVSYL
FBpp0252136
KH
456
515
FEVMTVNPSYYKHIIGKAGANVNRLKDELKVNINIEEREGQNNIRIEGPKEGVRQAQLEL
FBpp0252136
KH
527
588
SKDVIIDRRLHRSIIGAKGEKIREVKERYRQVTITIPTPQENTDIVKLRGPKEDVDKCHKDL
FBpp0252136
KH
601
661
IIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEAKDRI
FBpp0252136
KH
673
734
NEEVQISPKYYNSIIGTGGKLISAIMEECGGVSIKFPNSDSKSDKVTIRGPKDDVDKAKAQL
FBpp0252136
KH
747
808
TTEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDTDKEVITIIGKEESVKKAKEQL
FBpp0252136
KH
820
881
EGEVSVDPRHHKHFVAKRGQILHRISEECGGVMISFPRPGSNSDKVTIKGAKDCIEAAKQRI
FBpp0252136
KH
893
990
TIEVIIPQRQHRTIMGARGFKVQQVTSEFDVQIKFPDRDATDPVEGLTNGTTGVNGEGDGLSQGQEDGSDQTVEPVRQCDVIRITGRIEKCLAAKQAL
FBpp0252136
KH
997
1057
EEELSVPFDLHRTIIGPRGANVRQFMSKYDVHVELPPSELKSDIIKVSGTPAHVAEAKEAL
FBpp0252136
KH
1077
1138
VLQIDVDTEYHSKLIGRHGAVINKLRADHDVNISLPKRDDPNQRIISITGYQANAEKARDAI
FBpp0252136
KH
1150
1213
REVIEIDTRIHSHIIGQRGRTIRKIIEDHKVDIKFPSSDEAQNNPNAVTIIGKEEDVENAKEVL
Links
Other
KH
family RBPs
Other
Drosophila willistoni
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF12176
Drosophila ananassae
FBgn0089215
N
0.931
GA18708-RA
Drosophila pseudoobscura
FBgn0078708
N
0.929
GI20125
Drosophila mojavensis
FBgn0142861
N
0.908
GJ19895
Drosophila virilis
FBgn0207037
N
0.904
GL17775
Drosophila persimilis
FBgn0155378
N
0.899
Dp1
Drosophila melanogaster
FBgn0027835
N
0.897
GD11380
Drosophila simulans
FBgn0183129
N
0.894
GE11968
Drosophila yakuba
FBgn0229746
N
0.893
GG21892
Drosophila erecta
FBgn0114070
N
0.886
GM21884
Drosophila sechellia
FBgn0176761
N
0.884
GH21672
Drosophila grimshawi
FBgn0129133
N
0.882