CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GH21672
(
Drosophila grimshawi
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0129133
T19885_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0155578
KH
108
153
GESKRICQQITKDTGAQIEIVSGKNKSLTFLIKGKQSELLDARRKI
FBpp0155578
KH
162
222
SRQVTVPREHYRVILGKRGERLRELERVTATRINIPNQGDESDVITIAGTKNGIERAEQEI
FBpp0155578
KH
234
294
SDRTTVPKIYHPFIVGPYNENLNKLQEETGAKINVPPQHVQKEDIIISGEKDAVAAAKAKV
FBpp0155578
KH
307
367
TVSVEVAKPQHRYVIGPKGSTIAEILQLTGVSVEMPPNDSTLETITLRGPQVALGNALTVV
FBpp0155578
KH
376
432
SVEINAPHWIHKYVIGRKGANMKQLEEDCPNVNVNCLDNKIKLEGDPENVDRAVSYL
FBpp0155578
KH
445
504
YEVMAVNPSYYKHIIGKAGANVNRLKHELNVKINIEEREGENNIRIEGPKEGVRQAQLEL
FBpp0155578
KH
516
577
SKDVIIDRRLHRSIIGAKGEKIREVKDRYRQVTITIPTPKENTDIVKLRGPKEDVDKCHKDL
FBpp0155578
KH
590
650
IIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEAKERI
FBpp0155578
KH
662
723
TEEVQISPKYYNSIIGTGGKLISAIMEECGGVTIKFPNSDSKSDKVTIRGPKDDVEKAKAQL
FBpp0155578
KH
736
797
SVEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDSDKEAIIIIGKEENVNKAKEQL
FBpp0155578
KH
809
870
EGVVIVDPKHHKHFVAKRATILHRISEECGGVIISFPRSGTNSATVTIKGAKECIEAAKQRI
FBpp0155578
KH
882
971
TIEVVIPQRQHRTIMGARGFKVQQVTSEFDVQIKFPDRDATEPIESLTNGVNGEGEEGADGEPSAEQVRHCDVIRITGLIEKCEAAKQAL
FBpp0155578
KH
978
1038
EEELNVPFDLHRTIIGPRGARVRQFMSTHDVHVELPPSDLKSDVIKVSGTPARVAEAREAL
FBpp0155578
KH
1058
1119
VLQVEVDPEYHSKLIGRQGAVINKLRADHDVNISLPKRDDPNQHIISITGYQAKAESARDAI
FBpp0155578
KH
1131
1194
REVIEIDTRIHSHIIGHRGRTIRKIIEDYKVDIKFPSSDEGQTNANAVTIIGKEEDVENAKEML
Links
Other
KH
family RBPs
Other
Drosophila grimshawi
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ19895
Drosophila virilis
FBgn0207037
N
0.947
GI20125
Drosophila mojavensis
FBgn0142861
N
0.936
GF12176
Drosophila ananassae
FBgn0089215
N
0.894
GA18708-RA
Drosophila pseudoobscura
FBgn0078708
N
0.888
GK22993
Drosophila willistoni
FBgn0224955
N
0.882
GE11968
Drosophila yakuba
FBgn0229746
N
0.875
GD11380
Drosophila simulans
FBgn0183129
N
0.870
Dp1
Drosophila melanogaster
FBgn0027835
N
0.866
GG21892
Drosophila erecta
FBgn0114070
N
0.866
GM21884
Drosophila sechellia
FBgn0176761
N
0.859
GL17775
Drosophila persimilis
FBgn0155378
N
0.858