28226.m000850 (Ricinus communis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 28226.m000850 T20579_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
28226.m000850 KH 28 86
28226.m000850 KH 122 189
28226.m000850 KH 306 367

Links

Other KH family RBPs
Other Ricinus communis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30198.m000862 Ricinus communis 30198.m000862 N 0.738
PEP Arabidopsis thaliana AT4G26000-TAIR-G N 0.725
cassava18339.valid.m1 Manihot esculenta cassava18339.valid.m1 N 0.879
chr4.CM0244.150.nd Lotus japonicus chr4.CM0244.150.nd N 0.788
Cucsa.089000 Cucumis sativus Cucsa.089000 N 0.779
XM_002869589.1 Arabidopsis lyrata fgenesh2_kg.7__1649__AT4G26000.1 N 0.725
Glyma09g06750.1 Glycine max Glyma09g06750.1 N 0.763
Glyma13g00510.1 Glycine max Glyma13g00510.1 N 0.768
Glyma17g06640.1 Glycine max Glyma17g06640.1 N 0.772
MDP0000135143 Malus x domestica MDP0000135143 N 0.721
Medtr2g042750 Medicago truncatula Medtr2g042750 N 0.711
Medtr8g129730 Medicago truncatula Medtr8g129730 N 0.726
mgf013216m Mimulus guttatus mgf013216m N 0.743
B9N6B7_POPTR Populus trichocarpa POPTR_0006s29200 N 0.832
ppa004405m Prunus persica ppa004405m N 0.764