TERG_04493 (Trichophyton rubrum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 TERG_04493 T23948_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TERG_04493T0 PUF 510 544
TERG_04493T0 PUF 546 579
TERG_04493T0 PUF 586 607
TERG_04493T0 PUF 623 656
TERG_04493T0 PUF 658 692
TERG_04493T0 PUF 699 729
TERG_04493T0 PUF 743 770

Links

Other PUF family RBPs
Other Trichophyton rubrum RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_02637 Botrytis cinerea BC1G_02637 N 0.768
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.877
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.841
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.877
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.864
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.782
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.918
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.918
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.813
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.791
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.796
fgenesh1_pm.7_#_317 Myceliophthora thermophila fgenesh1_pm.7_#_317 N 0.791
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.811
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.789
FVEG_04902 Fusarium verticillioides FVEG_04902 N 0.789
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.743
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.807
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.778
MCYG_01907 Microsporum canis MCYG_01907 N 0.991
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.991
NCU01760 Neurospora crassa NCU01760 N 0.791
Pa_3_5000 Podospora anserina Pa_3_5000 N 0.788
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.869
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.813
SS1G_01761 Sclerotinia sclerotiorum SS1G_01761 N 0.768
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.991
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.995
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.910
VDAG_08882 Verticillium dahliae VDAG_08882 N 0.769
VDBG_05223 Verticillium albo atrum VDBG_05223 N 0.769