Pa_3_5000 (Podospora anserina)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Pa_3_5000 T25212_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_3_5000 PUF 396 428
Pa_3_5000 PUF 431 464
Pa_3_5000 PUF 471 496
Pa_3_5000 PUF 507 541
Pa_3_5000 PUF 551 577
Pa_3_5000 PUF 583 613
Pa_3_5000 PUF 628 655

Links

Other PUF family RBPs
Other Podospora anserina RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCU01760 Neurospora crassa NCU01760 N 0.972
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.972
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.958
fgenesh1_pm.7_#_317 Myceliophthora thermophila fgenesh1_pm.7_#_317 N 0.958
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.958
BC1G_02637 Botrytis cinerea BC1G_02637 N 0.927
SS1G_01761 Sclerotinia sclerotiorum SS1G_01761 N 0.927
VDAG_08882 Verticillium dahliae VDAG_08882 N 0.913
VDBG_05223 Verticillium albo atrum VDBG_05223 N 0.913
FVEG_04902 Fusarium verticillioides FVEG_04902 N 0.913
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.913
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.903
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.821
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.819
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.811
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.811
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.795
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.791
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.789
TERG_04493 Trichophyton rubrum TERG_04493 N 0.788
MCYG_01907 Microsporum canis MCYG_01907 N 0.787
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.783
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.783
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.782
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.782
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.782
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.772
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.763
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.756
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.756