CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_07983
(
Fusarium oxysporum
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
FOXG_07983
T23823_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_07983T0
PUF
452
485
IVAQAYPLMINRFGNFLVQRCFEHGTPDQVINIA
FOXG_07983T0
PUF
487
520
AIRGNTLNLSMDPFGCHVVQKAFDSVPENFKAIM
FOXG_07983T0
PUF
527
552
RIPETVIHRYACHVWQKLFELRWTES
FOXG_07983T0
PUF
564
597
LRGMWHEVALGETGSLVVQNIFENCLEEDKRPCI
FOXG_07983T0
PUF
607
633
VAHGQFGNWCIQHICEHGAPPDRSRAI
FOXG_07983T0
PUF
638
669
RYAAEYSTDQFASKVVEKCLKIGGAEFLGRYL
FOXG_07983T0
PUF
684
712
LIDIASDQYGNYLIQWILNNASPQHREIV
Links
Other
PUF
family RBPs
Other
Fusarium oxysporum
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FVEG_04902
Fusarium verticillioides
FVEG_04902
N
1.000
estExt_fgenesh1_pm.C_130085
Neurospora tetrasperma
estExt_fgenesh1_pm.C_130085
N
0.917
NCU01760
Neurospora crassa
NCU01760
N
0.917
Pa_3_5000
Podospora anserina
Pa_3_5000
N
0.913
fgenesh1_pm.7_#_317
Myceliophthora thermophila
fgenesh1_pm.7_#_317
N
0.912
SS1G_01761
Sclerotinia sclerotiorum
SS1G_01761
N
0.908
BC1G_02637
Botrytis cinerea
BC1G_02637
N
0.908
fgenesh2_pm.6_#_443
Thielavia terrestris
fgenesh2_pm.6_#_443
N
0.908
CHGG_10227
Chaetomium globosum
CHGG_10227
N
0.908
VDAG_08882
Verticillium dahliae
VDAG_08882
N
0.882
VDBG_05223
Verticillium albo atrum
VDBG_05223
N
0.882
GLRG_05168
Colletotrichum graminicola
GLRG_05168
N
0.875
GSTUMT00009368001
Tuber melanosporum
GSTUMT00009368001
N
0.827
e_gw1.2.144.1
Mycosphaerella graminicola
e_gw1.2.144.1
N
0.803
gw1.14.69.1
Mycosphaerella fijiensis
gw1.14.69.1
N
0.801
EAT91264.2
Phaeosphaeria nodorum
EAT91264.2
N
0.793
MGYG_04164
Microsporum gypseum
MGYG_04164
N
0.793
SNOG_01615
Stagonospora nodorum
SNOG_01615
N
0.793
TERG_04493
Trichophyton rubrum
TERG_04493
N
0.789
MCYG_01907
Microsporum canis
MCYG_01907
N
0.789
TESG_00492
Trichophyton tonsurans
TESG_00492
N
0.785
TEQG_03139
Trichophyton equinum
TEQG_03139
N
0.785
UREG_04073
Uncinocarpus reesii
UREG_04073
N
0.780
PMAA_095580
Penicillium marneffei
PMAA_095580
N
0.773
CIMG_06323
Coccidioides immitis
CIMG_06323
N
0.768
CPSG_00751
Coccidioides posadasii
CPSG_00751
N
0.768
NFIA_037730
Neosartorya fischeri
CADNFIAG00003211
N
0.760
AO090102000642
Aspergillus oryzae
CADAORAG00009924
N
0.744
AFLA_007170
Aspergillus flavus
CADAFLAG00010780
N
0.744
AFUA_5G04340
Aspergillus fumigatus
CADAFUAG00002839
N
0.743