VDBG_05223 (Verticillium albo atrum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 VDBG_05223 T23968_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_05223T0 PUF 443 476
VDBG_05223T0 PUF 479 512
VDBG_05223T0 PUF 519 544
VDBG_05223T0 PUF 555 589
VDBG_05223T0 PUF 600 625
VDBG_05223T0 PUF 628 661
VDBG_05223T0 PUF 676 704

Links

Other PUF family RBPs
Other Verticillium albo atrum RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_08882 Verticillium dahliae VDAG_08882 N 1.000
Pa_3_5000 Podospora anserina Pa_3_5000 N 0.913
SS1G_01761 Sclerotinia sclerotiorum SS1G_01761 N 0.900
BC1G_02637 Botrytis cinerea BC1G_02637 N 0.900
fgenesh1_pm.7_#_317 Myceliophthora thermophila fgenesh1_pm.7_#_317 N 0.895
NCU01760 Neurospora crassa NCU01760 N 0.891
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.891
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.890
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.886
FVEG_04902 Fusarium verticillioides FVEG_04902 N 0.882
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.882
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.872
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.836
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.808
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.806
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.806
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.797
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.776
TERG_04493 Trichophyton rubrum TERG_04493 N 0.769
MCYG_01907 Microsporum canis MCYG_01907 N 0.768
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.764
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.764
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.758
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.750
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.750
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.749
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.744
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.731
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.728
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.728