fus (Xenopus tropicalis)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSXETG00000001951 T25683_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.973
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000004150 RRM 51 129
ENSXETP00000004150 RanBP ZF 187 218
ENSXETP00000004156 RRM 298 376
ENSXETP00000004156 RanBP ZF 434 465
ENSXETP00000004177 RRM 292 370
ENSXETP00000004177 RanBP ZF 428 459

Links

Other RanBP ZF,RRM family RBPs
Other Xenopus tropicalis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CC1G_04529 Coprinopsis cinerea CC1G_04529 N 0.000
estExt_fgenesh2_kg.C_101139 Serpula lacrymans estExt_fgenesh2_kg.C_101139 N 0.000
estExt_fgenesh2_kg.C_60140 Agaricus bisporus estExt_fgenesh2_kg.C_60140 N 0.000
estExt_Genewise1Plus.C_1900018 Postia placenta estExt_Genewise1Plus.C_1900018 N 0.000
estExt_Genewise1Plus.C_31798 Mucor circinelloides estExt_Genewise1Plus.C_31798 N 0.000
estExt_Genewise1Plus.C_510049 Melampsora laricis populina estExt_Genewise1Plus.C_510049 N 0.000
estExt_Genewise1Plus.C_60119 Heterobasidion annosum estExt_Genewise1Plus.C_60119 N 0.000
e_gw1.10.249.1 Sporobolomyces roseus e_gw1.10.249.1 N 0.000
e_gww2.6.559.1 Phanerochaete chrysosporium e_gww2.6.559.1 N 0.000
fgenesh2_pg.4_#_679 Schizophyllum commune fgenesh2_pg.4_#_679 N 0.000
fgenesh3_pm.29__13 Postia placenta fgenesh3_pm.29__13 N 0.000
genemark.4513_g Pleurotus ostreatus genemark.4513_g N 0.000
PGTG_17668 Puccinia graminis PGTG_17668 N 0.000
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.000