CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
FUS
(
Homo sapiens
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSG00000089280
T25561_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
FUS
M316_0.6
Homo sapiens
GGUG
SELEX
Cook et al.(2011)
637_11098054
(Direct)
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000254108
RRM
287
365
IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIK
ENSP00000254108
RanBP ZF
422
453
RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD
ENSP00000369594
RRM
42
92
KKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIK
ENSP00000378041
RRM
216
294
IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIK
ENSP00000378041
RanBP ZF
351
382
RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD
ENSP00000395493
RRM
285
363
IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIK
ENSP00000395493
RanBP ZF
420
451
RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD
Links
Other
RanBP ZF,RRM
family RBPs
Other
Homo sapiens
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUS
Macaca mulatta
ENSMMUG00000019637
I
1.000
FUS
Sus scrofa
ENSSSCG00000007759
I
1.000
FUS
Monodelphis domestica
ENSMODG00000001889
I
1.000
FUS
Pteropus vampyrus
ENSPVAG00000003097
I
1.000
Fus
Mus musculus
ENSMUSG00000030795
I
1.000
FUS
Pan troglodytes
ENSPTRG00000008038
I
1.000
FUS
Oryctolagus cuniculus
ENSOCUG00000021526
I
1.000
LOC100395517
Callithrix jacchus
ENSCJAG00000003169
I
1.000
FUS
Erinaceus europaeus
ENSEEUG00000004934
I
1.000
FUS_BOVIN
Bos taurus
ENSBTAG00000005757
I
1.000
FUS
Gorilla gorilla
ENSGGOG00000003707
I
1.000
FUS
Anolis carolinensis
ENSACAG00000006776
I
1.000
FUS
Ornithorhynchus anatinus
ENSOANG00000005606
I
0.991
Fus
Rattus norvegicus
ENSRNOG00000023360
I
0.991
FUS
Canis familiaris
ENSCAFG00000016862
I
0.991
FUS
Macropus eugenii
ENSMEUG00000000968
I
0.982
fus
Xenopus tropicalis
ENSXETG00000001951
I
0.973
AAH74437
Xenopus laevis
AAH74437
I
0.973
AAH44319
Xenopus laevis
AAH44319
I
0.964
D3ZSJ6_RAT
Rattus norvegicus
ENSRNOG00000028611
I
0.964
FUS
Tarsius syrichta
ENSTSYG00000011757
I
0.937
FUS
Loxodonta africana
ENSLAFG00000001643
I
0.919
ENSETEG00000015358
Echinops telfairi
ENSETEG00000015358
I
0.892
FUS
Choloepus hoffmanni
ENSCHOG00000010780
I
0.883
FUS
Tetraodon nigroviridis
ENSTNIG00000011303
I
0.874
FUS
Gasterosteus aculeatus
ENSGACG00000014903
I
0.856
TAF15
Gallus gallus
ENSGALG00000002060
I
0.793
TAF15
Meleagris gallopavo
ENSMGAG00000003842
I
0.793
TAF15
Taeniopygia guttata
ENSTGUG00000004702
I
0.793
TAF15
Loxodonta africana
ENSLAFG00000018332
I
0.766
TAF15
Gorilla gorilla
ENSGGOG00000005693
I
0.766
Ame_R012008
Ailuropoda melanoleuca
Ame_R012008
I
0.766
TAF15
Canis familiaris
ENSCAFG00000018176
I
0.766
LOC100071562
Equus caballus
ENSECAG00000000718
I
0.766
TAF15
Homo sapiens
ENSG00000172660
I
0.766
TAF15
Danio rerio
ENSDARG00000070019
I
0.766
LOC100391580
Callithrix jacchus
ENSCJAG00000014961
I
0.766
TAF15
Tursiops truncatus
ENSTTRG00000014145
I
0.766
ENSCJAG00000002807
Callithrix jacchus
ENSCJAG00000002807
I
0.766
TAF15
Bos taurus
ENSBTAG00000006916
I
0.766
TAF15
Myotis lucifugus
ENSMLUG00000002870
I
0.766
Taf15
Rattus norvegicus
ENSRNOG00000010604
I
0.766
TAF15
Sorex araneus
ENSSARG00000012092
I
0.766
TAF15
Pteropus vampyrus
ENSPVAG00000003952
I
0.766
TAF15
Pan troglodytes
ENSPTRG00000009026
I
0.766
TAF15
Procavia capensis
ENSPCAG00000009582
I
0.766
TAF15
Oryctolagus cuniculus
ENSOCUG00000002838
I
0.766
TAF15
Macaca mulatta
ENSMMUG00000003305
I
0.766
Taf15
Mus musculus
ENSMUSG00000020680
I
0.766
TAF15
Sus scrofa
ENSSSCG00000017707
I
0.766
TAF15
Oryzias latipes
ENSORLG00000011382
I
0.757
ENSPPYG00000008194
Pongo pygmaeus
ENSPPYG00000008194
I
0.757
TAF15
Tetraodon nigroviridis
ENSTNIG00000004057
I
0.748
TAF15
Dasypus novemcinctus
ENSDNOG00000006956
I
0.748
ENSPPYG00000007311
Pongo pygmaeus
ENSPPYG00000007311
I
0.748
TAF15
Ornithorhynchus anatinus
ENSOANG00000014273
I
0.748
TAF15
Takifugu rubripes
ENSTRUG00000007798
I
0.739
TAF15
Cavia porcellus
ENSCPOG00000010259
I
0.739
ENSRNOG00000024836
Rattus norvegicus
ENSRNOG00000024836
I
0.730
AAH77935
Xenopus laevis
AAH77935
I
0.730
AAH81071
Xenopus laevis
AAH81071
I
0.721
TAF15
Macropus eugenii
ENSMEUG00000006009
I
0.712
ENSCJAG00000002118
Callithrix jacchus
ENSCJAG00000002118
I
0.703
TAF15
Monodelphis domestica
ENSMODG00000019123
I
0.703