CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_785599.1
(
Strongylocentrotus purpuratus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
XP_785599.1
T27917_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_785599.1
RanBP ZF
10
40
DGDWVCSNGKCTNVNFARRTHCNRCGTEKSR
XP_785599.1
RanBP ZF
63
92
SADDWQCKMCGNVNWARRNECNVCHSPKFG
Links
Other
RanBP ZF
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
125254
Helobdella robusta
125254
I
0.721
AAH84309
Xenopus laevis
AAH84309
I
0.710
AAI33785
Xenopus laevis
AAI33785
I
0.726
CAA65321
Xenopus laevis
CAA65321
I
0.726
ZRANB2
Anolis carolinensis
ENSACAG00000004293
I
0.710
zranb2
Danio rerio
ENSDARG00000044332
I
0.710
ZRANB2
Gasterosteus aculeatus
ENSGACG00000009457
I
0.710
ZRAB2_CHICK
Gallus gallus
ENSGALG00000011340
I
0.710
zranb2
Xenopus tropicalis
ENSXETG00000024108
I
0.710
estExt_Genewise1Plus.C_900027
Capitella teleta
estExt_Genewise1Plus.C_900027
I
0.738
gw.348.48.1
Branchiostoma floridae
gw.348.48.1
I
0.726
PHUM217580
Pediculus humanus
PHUM217580
N
0.721
XP_001189132.1
Strongylocentrotus purpuratus
XP_001189132.1
N
1.000