CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_05499
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_05499
T29829_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_05499T0
RRM
121
196
LYISDLHWWTTDDEVRGWINQAGVEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATIAKHKIEEMNNAQQGGRKY
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.711
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.711
ATEG_08730
Aspergillus terreus
CADATEAG00006712
N
0.711
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.711
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.750
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.737
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.711
MCYG_08048
Microsporum canis
MCYG_08048
N
0.895
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.724
UREG_00439
Uncinocarpus reesii
UREG_00439
N
0.724