CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_08048
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_08048
T29730_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_08048T0
RRM
116
189
LYISDLHWWTTDDEIRGWVNQAGAEADLKDVTFSEHKVNGKSKGQAFVEFTSAQAATAAKHRIEEMNNAQQGAR
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_05499
Microsporum gypseum
MGYG_05499
N
0.895
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.797
UREG_00439
Uncinocarpus reesii
UREG_00439
N
0.784
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.784
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.757
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.743
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.743
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.743
ATEG_08730
Aspergillus terreus
CADATEAG00006712
N
0.743
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.730