CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_00439
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_00439
T31317_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_00439
RRM
112
184
LYISDLYWWTTDDEIRGWVNEASCEDELKDVTFSEHKVNGKSKGQAFVEFRSPQAATAAKRKIESLNSNQQNA
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.836
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.822
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.795
MCYG_08048
Microsporum canis
MCYG_08048
N
0.784
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.781
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.781
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.781
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.781
ATEG_08730
Aspergillus terreus
CADATEAG00006712
N
0.757
GSTUMT00002679001
Tuber melanosporum
GSTUMT00002679001
N
0.740
AO090020000304
Aspergillus oryzae
CADAORAG00006798
N
0.730
AFLA_101100
Aspergillus flavus
CADAFLAG00011847
N
0.730
MGYG_05499
Microsporum gypseum
MGYG_05499
N
0.724
ANIA_04799
Aspergillus nidulans
CADANIAG00005622
N
0.712