CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_07308
(
Puccinia triticina
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PTTG_07308
T30386_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_07308T0
RRM
182
252
VYLGRIPQGFYENEMRAYFTQFGEVLRLRLSRCKRTGKPKHYAFIEFKHVEVAQIVAETIHNYLLCGKLLQ
Links
Other
RRM
family RBPs
Other
Puccinia triticina
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1.C_820021
Melampsora laricis populina
estExt_Genewise1.C_820021
N
0.746
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.704
PGTG_07909
Puccinia graminis
PGTG_07909
N
0.944
RO3G_08088
Rhizopus oryzae
RO3G_08088
N
0.704