GSTUMT00006382001 (Tuber melanosporum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSTUMT00006382001 T56941_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSTUMT00006382001 RRM 235 305

Links

Other RRM family RBPs
Other Tuber melanosporum RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.803
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.803
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.803
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.789
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.789
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.789
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.789
TERG_07689 Trichophyton rubrum TERG_07689 N 0.789
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.789
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.789
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.789
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.789
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.789
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.789
An04g00680 Aspergillus niger CADANGAG00003776 N 0.789
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.789
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.775
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.775
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.775
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.775
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.775
MCYG_01275 Microsporum canis MCYG_01275 N 0.775
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.761
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.761
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.761
gw1.11.214.1 Batrachochytrium dendrobatidis gw1.11.214.1 N 0.761
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.761
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.761
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.761
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.746
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.746
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.746
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.746
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.746
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.746
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.732
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.732
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.732
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.732
VDBG_05329 Verticillium albo atrum VDBG_05329 N 0.732
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.732
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.732
VDAG_06981 Verticillium dahliae VDAG_06981 N 0.732
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.718
gw1.7.2291.1 Myceliophthora thermophila gw1.7.2291.1 N 0.718
FVEG_11271 Fusarium verticillioides FVEG_11271 N 0.718
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.718
FOXG_13842 Fusarium oxysporum FOXG_13842 N 0.718
CHGG_10382 Chaetomium globosum CHGG_10382 N 0.718
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.718
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.718
PK02111.1 Cannabis sativa PK02111.1 N 0.718
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.704
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.704
EDP41651.1 Malassezia globosa EDP41651.1 N 0.704
PGUG_03493 Candida guilliermondii PGUG_03493 N 0.704
estExt_Genewise1.C_170171 Neurospora tetrasperma estExt_Genewise1.C_170171 N 0.704
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.704
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.704
NCU08518 Neurospora crassa NCU08518 N 0.704
Pa_3_7140 Podospora anserina Pa_3_7140 N 0.704
estExt_fgenesh1_pg.C_130152 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_130152 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.704
PTTG_07308 Puccinia triticina PTTG_07308 N 0.704
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.704
estExt_Genewise1Plus.C_100354 Neurospora discreta estExt_Genewise1Plus.C_100354 N 0.704
PTRG_04434 Pyrenophora tritici repentis PTRG_04434 N 0.704