CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_4G06350
(
Aspergillus fumigatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADAFUAG00008260
T33523_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00008260
RRM
264
334
VYVGRIPHGFYEHQMRAYFSQFGDITRLRLSRNRITGRSKHYAFVEFASSTVAKIVAETMDNYLMYGHILK
Links
Other
RRM
family RBPs
Other
Aspergillus fumigatus
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_045660
Aspergillus clavatus
CADACLAG00004652
N
0.958
CHGG_10382
Chaetomium globosum
CHGG_10382
N
0.000
estExt_Genewise1Plus.C_100354
Neurospora discreta
estExt_Genewise1Plus.C_100354
N
0.000
estExt_Genewise1Plus.C_61440
Thielavia terrestris
estExt_Genewise1Plus.C_61440
N
0.000
e_gw1.11.592.1
Nectria haematococca
e_gw1.11.592.1
N
0.732
FGSG_04392
Fusarium graminearum
FGSG_04392
N
0.718
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.775
gw1.7.2291.1
Myceliophthora thermophila
gw1.7.2291.1
N
0.000
NCU08518
Neurospora crassa
NCU08518
N
0.000
Pa_3_7140
Podospora anserina
Pa_3_7140
N
0.000