e_gw1.11.592.1 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.11.592.1 T49708_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.11.592.1 RRM 152 222

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.972
FVEG_11271 Fusarium verticillioides FVEG_11271 N 0.944
FOXG_13842 Fusarium oxysporum FOXG_13842 N 0.944
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.845
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.817
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.817
MGG_12370 Magnaporthe oryzae MGG_12370 N 0.775
fgenesh1_pg.C_scaffold_2000511 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2000511 N 0.761
GLRG_08650 Colletotrichum graminicola GLRG_08650 N 0.746
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.746
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.746
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.732
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.732
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.718
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.718
An04g00680 Aspergillus niger CADANGAG00003776 N 0.704
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.704
NCU08518 Neurospora crassa NCU08518 N 0.704
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.704
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.704
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.704
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.704
estExt_Genewise1Plus.C_100354 Neurospora discreta estExt_Genewise1Plus.C_100354 N 0.704
estExt_Genewise1.C_170171 Neurospora tetrasperma estExt_Genewise1.C_170171 N 0.704
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.704
Pa_3_7140 Podospora anserina Pa_3_7140 N 0.704
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.704
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.704