CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_05009
(
Aspergillus nidulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADANIAG00005383
T33622_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00005383
RRM
415
478
LFVGNLPTERVTKRDLFHIFHSYGKLAQISIKQAYGFIQFLEASSCKRALEGEQGAIVRGRKVH
Links
Other
RRM
family RBPs
Other
Aspergillus nidulans
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB02178.1
Alternaria brassicicola
AB02178.1
N
0.719
ARB_01198
Arthroderma benhamiae
ARB_01198
N
0.766
BC1G_15263
Botrytis cinerea
BC1G_15263
N
0.719
ACLA_037570
Aspergillus clavatus
CADACLAG00003297
N
0.844
AFLA_085050
Aspergillus flavus
CADAFLAG00001284
N
0.891
AFUA_3G09770
Aspergillus fumigatus
CADAFUAG00005073
N
0.844
An16g03400
Aspergillus niger
CADANGAG00012812
N
0.875
AO090005001273
Aspergillus oryzae
CADAORAG00003159
N
0.891
ATEG_04498
Aspergillus terreus
CADATEAG00009601
N
0.859
NFIA_067530
Neosartorya fischeri
CADNFIAG00005936
N
0.844
EAT78031.2
Phaeosphaeria nodorum
EAT78031.2
N
0.703
fgenesh1_pm.00168_#_218
Aspergillus carbonarius
fgenesh1_pm.00168_#_218
N
0.859
GSTUMT00007469001
Tuber melanosporum
GSTUMT00007469001
N
0.734
MCYG_03431
Microsporum canis
MCYG_03431
N
0.812
MGYG_00597
Microsporum gypseum
MGYG_00597
N
0.781
Pc12g15760
Penicillium chrysogenum
Pc12g15760
N
0.891
Pc22g26960
Penicillium chrysogenum
Pc22g26960
N
0.844
PMAA_025600
Penicillium marneffei
PMAA_025600
N
0.781
PTRG_03270
Pyrenophora tritici repentis
PTRG_03270
N
0.719
SNOG_14491
Stagonospora nodorum
SNOG_14491
N
0.719
SS1G_11879
Sclerotinia sclerotiorum
SS1G_11879
N
0.719
TEQG_00939
Trichophyton equinum
TEQG_00939
N
0.781
TERG_00938
Trichophyton rubrum
TERG_00938
N
0.781
TESG_04474
Trichophyton tonsurans
TESG_04474
N
0.781
TRV_03302
Trichophyton verrucosum
TRV_03302
N
0.766