An16g03400 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00012812 T33583_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00012571 RRM 267 330

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.00168_#_218 Aspergillus carbonarius fgenesh1_pm.00168_#_218 N 0.984
AFLA_085050 Aspergillus flavus CADAFLAG00001284 N 0.938
ATEG_04498 Aspergillus terreus CADATEAG00009601 N 0.938
AO090005001273 Aspergillus oryzae CADAORAG00003159 N 0.938
ANIA_05009 Aspergillus nidulans CADANIAG00005383 N 0.875
ACLA_037570 Aspergillus clavatus CADACLAG00003297 N 0.859
Pc12g15760 Penicillium chrysogenum Pc12g15760 N 0.859
AFUA_3G09770 Aspergillus fumigatus CADAFUAG00005073 N 0.859
NFIA_067530 Neosartorya fischeri CADNFIAG00005936 N 0.859
Pc22g26960 Penicillium chrysogenum Pc22g26960 N 0.797
MCYG_03431 Microsporum canis MCYG_03431 N 0.797
PMAA_025600 Penicillium marneffei PMAA_025600 N 0.797
TERG_00938 Trichophyton rubrum TERG_00938 N 0.781
TESG_04474 Trichophyton tonsurans TESG_04474 N 0.781
MGYG_00597 Microsporum gypseum MGYG_00597 N 0.781
TEQG_00939 Trichophyton equinum TEQG_00939 N 0.781
TRV_03302 Trichophyton verrucosum TRV_03302 N 0.766
ARB_01198 Arthroderma benhamiae ARB_01198 N 0.766
AB02178.1 Alternaria brassicicola AB02178.1 N 0.734
PTRG_03270 Pyrenophora tritici repentis PTRG_03270 N 0.734
SNOG_14491 Stagonospora nodorum SNOG_14491 N 0.734
EAT78031.2 Phaeosphaeria nodorum EAT78031.2 N 0.719
GSTUMT00007469001 Tuber melanosporum GSTUMT00007469001 N 0.719
SS1G_11879 Sclerotinia sclerotiorum SS1G_11879 N 0.703