CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM15B
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000010266
T35086_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000015065
RRM
148
205
PALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDAREARQHALARQL
ENSCAFP00000015065
RRM
338
407
LFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMSGRVIGRNPIK
ENSCAFP00000015065
RRM
419
481
LWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPD
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH46695
Xenopus laevis
AAH46695
I
0.000
Ame_R010918
Ailuropoda melanoleuca
Ame_R010918
I
0.000
ENSACAG00000005327
Anolis carolinensis
ENSACAG00000005327
I
0.000
Q3ZBU5_BOVIN
Bos taurus
ENSBTAG00000008072
I
0.000
XM_547294.2
Canis familiaris
ENSCAFG00000003095
I
0.000
ENSCAFG00000013066
Canis familiaris
ENSCAFG00000013066
I
0.000
ENSCHOG00000004836
Choloepus hoffmanni
ENSCHOG00000004836
I
0.000
ENSCHOG00000007773
Choloepus hoffmanni
ENSCHOG00000007773
I
0.000
SRSF12
Choloepus hoffmanni
ENSCHOG00000013911
I
0.000
LOC100396874
Callithrix jacchus
ENSCJAG00000000822
I
0.000
ENSCJAG00000002933
Callithrix jacchus
ENSCJAG00000002933
I
0.000
ENSCJAG00000007019
Callithrix jacchus
ENSCJAG00000007019
I
0.000
ENSCJAG00000010608
Callithrix jacchus
ENSCJAG00000010608
I
0.000
LOC100387136
Callithrix jacchus
ENSCJAG00000020883
I
0.000
ENSCJAG00000021801
Callithrix jacchus
ENSCJAG00000021801
I
0.000
SRSF12
Cavia porcellus
ENSCPOG00000010917
I
0.000
ENSCPOG00000024533
Cavia porcellus
ENSCPOG00000024533
I
0.000
ENSCSAVG00000005130
Ciona savignyi
ENSCSAVG00000005130
I
0.000
CR293507.1
Danio rerio
ENSDARG00000022415
I
0.000
Srsf10
Dipodomys ordii
ENSDORG00000009136
I
0.000
LOC100070965
Equus caballus
ENSECAG00000019135
I
0.000
ENSECAG00000023709
Equus caballus
ENSECAG00000023709
I
0.000
SRSF12
Erinaceus europaeus
ENSEEUG00000011026
I
0.000
ENSEEUG00000014286
Erinaceus europaeus
ENSEEUG00000014286
I
0.000
SRSF12
Echinops telfairi
ENSETEG00000001386
I
0.000
ENSFCAG00000002888
Felis catus
ENSFCAG00000002888
I
0.000
SRSF12
Homo sapiens
ENSG00000154548
I
0.000
Fusip1
Homo sapiens
ENSG00000188529
D
0.000
BX511012.1
Homo sapiens
ENSG00000215699
I
0.000
ENSGACG00000002231
Gasterosteus aculeatus
ENSGACG00000002231
I
0.000
Q5ZMR4_CHICK
Gallus gallus
ENSGALG00000004133
I
0.000
ENSGGOG00000000392
Gorilla gorilla
ENSGGOG00000000392
I
0.000
SRSF12
Gorilla gorilla
ENSGGOG00000024850
I
0.000
SRSF12
Loxodonta africana
ENSLAFG00000005458
I
0.000
ENSLAFG00000026905
Loxodonta africana
ENSLAFG00000026905
I
0.000
ENSMGAG00000005772
Meleagris gallopavo
ENSMGAG00000005772
I
0.000
ENSMICG00000000520
Microcebus murinus
ENSMICG00000000520
I
0.000
ENSMICG00000017029
Microcebus murinus
ENSMICG00000017029
I
0.000
SRSF12
Myotis lucifugus
ENSMLUG00000001545
I
0.000
ENSMMUG00000013784
Macaca mulatta
ENSMMUG00000013784
I
0.000
SRSF12
Macaca mulatta
ENSMMUG00000014941
I
0.000
XM_001362581.1
Monodelphis domestica
ENSMODG00000013020
I
0.000
SRSF12
Monodelphis domestica
ENSMODG00000018282
I
0.000
Srsf10
Mus musculus
ENSMUSG00000028676
I
0.000
Srsf12
Mus musculus
ENSMUSG00000054679
I
0.000
SRSF12
Oryctolagus cuniculus
ENSOCUG00000000945
I
0.000
ENSOCUG00000021782
Oryctolagus cuniculus
ENSOCUG00000021782
I
0.000
ENSOCUG00000024013
Oryctolagus cuniculus
ENSOCUG00000024013
I
0.000
ENSOCUG00000028110
Oryctolagus cuniculus
ENSOCUG00000028110
I
0.000
SRSF12
Otolemur garnettii
ENSOGAG00000006421
I
0.000
ENSOGAG00000015374
Otolemur garnettii
ENSOGAG00000015374
I
0.000
SRSF12
Ochotona princeps
ENSOPRG00000016052
I
0.000
ENSOPRG00000018613
Ochotona princeps
ENSOPRG00000018613
I
0.000
SRSF10
Oryzias latipes
ENSORLG00000007691
I
0.000
ENSPCAG00000004059
Procavia capensis
ENSPCAG00000004059
I
0.000
SRSF12
Procavia capensis
ENSPCAG00000010020
I
0.000
ENSPPYG00000001726
Pongo pygmaeus
ENSPPYG00000001726
I
0.000
SRSF12
Pan troglodytes
ENSPTRG00000018415
I
0.000
XR_020461.1
Pan troglodytes
ENSPTRG00000024234
I
0.000
SRSF12
Pteropus vampyrus
ENSPVAG00000001046
I
0.000
ENSPVAG00000013611
Pteropus vampyrus
ENSPVAG00000013611
I
0.000
D3ZB38_RAT
Rattus norvegicus
ENSRNOG00000007992
I
0.000
Srrp
Rattus norvegicus
ENSRNOG00000024247
I
0.000
SRSF12
Sorex araneus
ENSSARG00000007795
I
0.000
SRSF12
Sus scrofa
ENSSSCG00000004313
I
0.000
ENSSTOG00000000956
Spermophilus tridecemlineatus
ENSSTOG00000000956
I
0.000
SRSF12
Spermophilus tridecemlineatus
ENSSTOG00000007170
I
0.000
ENSTBEG00000008665
Tupaia belangeri
ENSTBEG00000008665
I
0.000
ENSTBEG00000015120
Tupaia belangeri
ENSTBEG00000015120
I
0.000
FUSIP1
Taeniopygia guttata
ENSTGUG00000001178
I
0.000
SLC9A1
Tetraodon nigroviridis
ENSTNIG00000005725
I
0.000
SRSF10
Takifugu rubripes
ENSTRUG00000006317
I
0.000
SRSF12
Tarsius syrichta
ENSTSYG00000001269
I
0.000
ENSTSYG00000009439
Tarsius syrichta
ENSTSYG00000009439
I
0.000
SRSF12
Tursiops truncatus
ENSTTRG00000003682
I
0.000
ENSTTRG00000016150
Tursiops truncatus
ENSTTRG00000016150
I
0.000
SRSF12
Vicugna pacos
ENSVPAG00000004175
I
0.000
srsf12
Xenopus tropicalis
ENSXETG00000005385
I
0.000