CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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rbm15b
(
Xenopus tropicalis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSXETG00000000072
T42814_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000000136
RRM
4
74
LLISNLGSALPDPLLEDWLFRHFQRFGDISVKLSHTPELGRVAYINFRRPAEARQARHAKVRPVLYDRQLR
ENSXETP00000000136
RRM
163
232
LFIGNLDHMVSEVDLRRAFDKYGPIEEVVIKRPGRGQGAAYAFLRFQNLDMAHRAKLAMSGRLLGRNAMK
ENSXETP00000000136
RRM
244
308
LWVGGLGPNTSLAALAREFDRFGSIRTVDYVKGDSFAYIQYESLDAAQAACTQMRGFALGDRRLR
Links
Other
RRM
family RBPs
Other
Xenopus tropicalis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM15B
Gasterosteus aculeatus
ENSGACG00000001575
N
0.739
RBM15B
Pteropus vampyrus
ENSPVAG00000003221
N
0.728
RBM15B
Sus scrofa
ENSSSCG00000011420
N
0.728
RBM15B
Tursiops truncatus
ENSTTRG00000001431
N
0.728
RBM15B
Pan troglodytes
ENSPTRG00000014972
N
0.728
RBM15B
Macaca mulatta
ENSMMUG00000004279
N
0.728
RBM15B
Homo sapiens
ENSG00000179837
N
0.728
Ame_R007082
Ailuropoda melanoleuca
Ame_R007082
N
0.728
RBM15B
Canis familiaris
ENSCAFG00000010266
N
0.728
RBM15B
Cavia porcellus
ENSCPOG00000026615
N
0.714