CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF11
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000002456
T36746_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000002243
RRM
33
104
IQVTNVSPSANSEQMRTLFGFLGKIDELPLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALI
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH72078
Xenopus laevis
AAH72078
N
0.917
AAI10935
Xenopus laevis
AAI10935
N
0.889
Ame_R020987
Ailuropoda melanoleuca
Ame_R020987
N
0.972
SRSF11
Anolis carolinensis
ENSACAG00000013654
N
0.931
Q148M1_BOVIN
Bos taurus
ENSBTAG00000015474
N
0.972
ENSCJAG00000009424
Callithrix jacchus
ENSCJAG00000009424
N
0.833
LOC100400412
Callithrix jacchus
ENSCJAG00000017704
N
0.972
SRSF11
Cavia porcellus
ENSCPOG00000009554
N
0.861
srsf11
Danio rerio
ENSDARG00000004342
N
0.819
SREK1
Dasypus novemcinctus
ENSDNOG00000010327
N
0.708
Srsf11
Dipodomys ordii
ENSDORG00000000669
N
0.972
SRSF11
Homo sapiens
ENSG00000116754
N
0.972
SRSF11
Gasterosteus aculeatus
ENSGACG00000009346
N
0.806
SRSF11
Gasterosteus aculeatus
ENSGACG00000017855
N
0.778
Q5ZJ42_CHICK
Gallus gallus
ENSGALG00000011305
N
0.875
SRSF11
Gorilla gorilla
ENSGGOG00000005774
N
0.972
SRSF11
Loxodonta africana
ENSLAFG00000015882
N
0.972
SRSF11
Macropus eugenii
ENSMEUG00000000319
N
0.958
SRSF11
Microcebus murinus
ENSMICG00000005537
N
0.972
SRSF11
Myotis lucifugus
ENSMLUG00000006203
N
0.972
SFRS11
Macaca mulatta
ENSMMUG00000013852
N
0.972
SRSF11
Monodelphis domestica
ENSMODG00000000559
N
0.944
Srsf11
Mus musculus
ENSMUSG00000055436
N
0.972
SRSF11
Ornithorhynchus anatinus
ENSOANG00000015528
N
0.972
ENSOCUG00000002001
Oryctolagus cuniculus
ENSOCUG00000002001
N
0.972
ENSOCUG00000024114
Oryctolagus cuniculus
ENSOCUG00000024114
N
0.972
ENSOCUG00000025440
Oryctolagus cuniculus
ENSOCUG00000025440
N
0.972
SRSF11
Oryzias latipes
ENSORLG00000007753
N
0.806
SRSF11
Oryzias latipes
ENSORLG00000017357
N
0.792
SRSF11
Procavia capensis
ENSPCAG00000012684
N
0.972
ENSPPYG00000001245
Pongo pygmaeus
ENSPPYG00000001245
N
0.958
ENSPPYG00000015515
Pongo pygmaeus
ENSPPYG00000015515
N
0.708
SRSF11
Pan troglodytes
ENSPTRG00000000852
N
0.972
SRSF11
Pteropus vampyrus
ENSPVAG00000011918
N
0.972
D3ZDC8_RAT
Rattus norvegicus
ENSRNOG00000029592
N
0.972
SRSF11
Sorex araneus
ENSSARG00000005811
N
0.958
SRSF11
Sus scrofa
ENSSSCG00000003791
N
0.972
SRSF11
Tupaia belangeri
ENSTBEG00000004406
N
0.833
SRSF11
Tetraodon nigroviridis
ENSTNIG00000008514
N
0.806
SRSF11
Tetraodon nigroviridis
ENSTNIG00000010494
N
0.819
SRSF11
Takifugu rubripes
ENSTRUG00000009316
N
0.819
SRSF11
Takifugu rubripes
ENSTRUG00000017369
N
0.819
SRSF11
Tursiops truncatus
ENSTTRG00000015054
N
0.972
srsf11
Xenopus tropicalis
ENSXETG00000012371
N
0.917