CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SREK1
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000010327
T36328_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000007999
RRM
21
92
IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALI
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000015515
Pongo pygmaeus
ENSPPYG00000015515
N
1.000
SREK1
Felis catus
ENSFCAG00000015559
N
0.944
SREK1
Anolis carolinensis
ENSACAG00000016152
N
0.931
sfrs12
Xenopus tropicalis
ENSXETG00000021460
N
0.931
SRSF11
Anolis carolinensis
ENSACAG00000013654
N
0.736
SRSF11
Pteropus vampyrus
ENSPVAG00000011918
N
0.722
SRSF11
Pan troglodytes
ENSPTRG00000000852
N
0.722
ENSPPYG00000001245
Pongo pygmaeus
ENSPPYG00000001245
N
0.722
D3ZDC8_RAT
Rattus norvegicus
ENSRNOG00000029592
N
0.722
LOC100400412
Callithrix jacchus
ENSCJAG00000017704
N
0.722
SRSF11
Sus scrofa
ENSSSCG00000003791
N
0.722
Ame_R020987
Ailuropoda melanoleuca
Ame_R020987
N
0.722
Srsf11
Dipodomys ordii
ENSDORG00000000669
N
0.722
SRSF11
Tursiops truncatus
ENSTTRG00000015054
N
0.722
Q148M1_BOVIN
Bos taurus
ENSBTAG00000015474
N
0.722
SRSF11
Procavia capensis
ENSPCAG00000012684
N
0.722
SRSF11
Microcebus murinus
ENSMICG00000005537
N
0.722
ENSOCUG00000025440
Oryctolagus cuniculus
ENSOCUG00000025440
N
0.722
SRSF11
Loxodonta africana
ENSLAFG00000015882
N
0.722
SRSF11
Gorilla gorilla
ENSGGOG00000005774
N
0.722
SRSF11
Homo sapiens
ENSG00000116754
N
0.722
SFRS11
Macaca mulatta
ENSMMUG00000013852
N
0.722
SRSF11
Myotis lucifugus
ENSMLUG00000006203
N
0.722
ENSOCUG00000002001
Oryctolagus cuniculus
ENSOCUG00000002001
N
0.722
Srsf11
Mus musculus
ENSMUSG00000055436
N
0.722
ENSOCUG00000024114
Oryctolagus cuniculus
ENSOCUG00000024114
N
0.722
SRSF11
Ornithorhynchus anatinus
ENSOANG00000015528
N
0.722
SRSF11
Erinaceus europaeus
ENSEEUG00000002456
N
0.708
SRSF11
Macropus eugenii
ENSMEUG00000000319
N
0.708
SRSF11
Monodelphis domestica
ENSMODG00000000559
N
0.708
srsf11
Xenopus tropicalis
ENSXETG00000012371
N
0.708
SRSF11
Sorex araneus
ENSSARG00000005811
N
0.708
AAH72078
Xenopus laevis
AAH72078
N
0.708