CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP1
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000008757
T38530_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.727
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000007974
RRM
271
340
VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIE
ENSMICP00000007974
RRM
372
444
VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIE
ENSMICP00000007974
RRM
491
563
IRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVE
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
73 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44002
Xenopus laevis
AAH44002
I
0.940
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.718
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.995
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.931
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.806
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.718
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.991
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.995
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.718
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.995
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.718
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
1.000
esrp1
Danio rerio
ENSDARG00000011245
I
0.829
esrp2
Danio rerio
ENSDARG00000018814
I
0.829
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.773
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.782
Esrp1
Dipodomys ordii
ENSDORG00000011987
N
0.824
ESRP1
Equus caballus
ENSECAG00000000784
I
0.995
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.713
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.972
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.713
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.782
ESRP1
Felis catus
ENSFCAG00000009920
I
0.995
ESRP2
Felis catus
ENSFCAG00000010419
I
0.718
ESRP2
Homo sapiens
ENSG00000103067
D
0.727
ESRP1
Homo sapiens
ENSG00000104413
I
0.991
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.793
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.829
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.931
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.991
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.727
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
1.000
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.764
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.824
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.829
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.931
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.704
ESRP1
Myotis lucifugus
ENSMLUG00000001816
N
0.810
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.773
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.981
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.718
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.796
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.977
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.986
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.713
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.981
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.778
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.718
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.995
ESRP1
Ochotona princeps
ENSOPRG00000010595
N
0.829
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.769
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.778
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.722
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.991
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.722
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.991
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.995
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.986
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.769
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.769
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.995
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.819
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.940
ESRP1
Tetraodon nigroviridis
ENSTNIG00000018367
N
0.761
ESRP1
Takifugu rubripes
ENSTRUG00000009287
N
0.757
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.991
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.986
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.713
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.986
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.940
estExt_gwp.C_3900044
Branchiostoma floridae
estExt_gwp.C_3900044
N
0.704
estExt_gwp.C_3900052
Branchiostoma floridae
estExt_gwp.C_3900052
N
0.704
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.940