CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP1
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000012042
T38429_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.704
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000012651
RRM
188
257
IRARGLPWQSSDQDIAKFFKGLNIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIE
ENSMGAP00000012651
RRM
291
363
VRMRGLPFNVTTEEVLAFFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGRRYIE
ENSMGAP00000012651
RRM
410
482
IRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQKCHKKTMKDRYIE
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
57 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.981
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.972
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.940
AAH44002
Xenopus laevis
AAH44002
I
0.931
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.931
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.931
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.931
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.931
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.931
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.926
ESRP1
Felis catus
ENSFCAG00000009920
I
0.926
ESRP1
Equus caballus
ENSECAG00000000784
I
0.926
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.926
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.926
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.926
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.926
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.926
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.926
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.926
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.926
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.921
ESRP1
Homo sapiens
ENSG00000104413
I
0.921
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.921
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.921
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.921
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.921
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.917
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.917
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.917
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.912
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.903
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.819
esrp1
Danio rerio
ENSDARG00000011245
I
0.819
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.819
esrp2
Danio rerio
ENSDARG00000018814
I
0.819
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.810
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.806
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.796
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.783
ESRP1
Ochotona princeps
ENSOPRG00000010595
N
0.782
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.769
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.769
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.764
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.759
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.759
Esrp1
Dipodomys ordii
ENSDORG00000011987
N
0.755
ESRP1
Tetraodon nigroviridis
ENSTNIG00000018367
N
0.752
ESRP1
Myotis lucifugus
ENSMLUG00000001816
N
0.750
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.750
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.750
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.750
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.750
ESRP1
Takifugu rubripes
ENSTRUG00000009287
N
0.748
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.745
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.745
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.704
ESRP2
Homo sapiens
ENSG00000103067
D
0.704