CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM5
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000016179
T38587_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000014748
RRM
100
170
IMLRGLPITITESDIREMMESFEGPQPAVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHI
ENSMICP00000014748
RRM
211
280
IILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLK
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
46 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A0JMV4
Xenopus laevis
A0JMV4
I
0.831
AAH77408
Xenopus laevis
AAH77408
I
0.831
AAI26020
Xenopus laevis
AAI26020
I
0.831
Ame_R008692
Ailuropoda melanoleuca
Ame_R008692
I
0.993
RBM5
Anolis carolinensis
ENSACAG00000008580
I
0.870
RBM5_BOVIN
Bos taurus
ENSBTAG00000006330
I
0.993
RBM5
Canis familiaris
ENSCAFG00000010866
I
0.993
RBM5
Choloepus hoffmanni
ENSCHOG00000009429
I
0.894
A6MKZ6_CALJA
Callithrix jacchus
ENSCJAG00000004740
I
0.993
RBM5
Cavia porcellus
ENSCPOG00000008151
I
0.993
Rbm5
Dipodomys ordii
ENSDORG00000007692
I
0.993
LOC100052535
Equus caballus
ENSECAG00000020447
I
0.993
RBM5
Erinaceus europaeus
ENSEEUG00000005943
I
0.993
RBM5
Echinops telfairi
ENSETEG00000012773
I
0.944
RBM5
Felis catus
ENSFCAG00000014639
N
0.908
RBM5
Homo sapiens
ENSG00000003756
D
0.993
RBM5
Gasterosteus aculeatus
ENSGACG00000000858
I
0.704
RBM5
Gallus gallus
ENSGALG00000004626
I
0.917
RBM5
Gorilla gorilla
ENSGGOG00000014490
I
0.873
RBM5
Loxodonta africana
ENSLAFG00000006733
I
0.993
RBM5
Macropus eugenii
ENSMEUG00000012994
N
0.894
RBM5
Meleagris gallopavo
ENSMGAG00000003972
I
0.924
RBM5
Myotis lucifugus
ENSMLUG00000007875
I
0.986
RBM5
Macaca mulatta
ENSMMUG00000004921
I
0.993
RBM5
Monodelphis domestica
ENSMODG00000012301
I
0.965
Rbm5
Mus musculus
ENSMUSG00000032580
I
0.993
RBM5
Ornithorhynchus anatinus
ENSOANG00000006557
I
0.965
RBM5
Oryctolagus cuniculus
ENSOCUG00000011652
I
0.958
RBM5
Ochotona princeps
ENSOPRG00000015154
I
0.732
RBM5
Oryzias latipes
ENSORLG00000003369
I
0.732
RBM5
Procavia capensis
ENSPCAG00000005459
I
0.796
RBM5
Pan troglodytes
ENSPTRG00000014946
I
0.993
RBM5
Pteropus vampyrus
ENSPVAG00000006812
I
0.986
Rbm5
Rattus norvegicus
ENSRNOG00000018153
I
0.993
RBM5
Sorex araneus
ENSSARG00000009724
I
0.746
RBM5
Sus scrofa
ENSSSCG00000011395
I
0.993
RBM5
Spermophilus tridecemlineatus
ENSSTOG00000013856
I
0.993
RBM5
Tupaia belangeri
ENSTBEG00000005424
I
0.893
RBM5
Taeniopygia guttata
ENSTGUG00000006417
I
0.924
RBM5
Tetraodon nigroviridis
ENSTNIG00000014742
I
0.701
RBM5
Takifugu rubripes
ENSTRUG00000008292
I
0.732
RBM5
Tarsius syrichta
ENSTSYG00000004158
I
0.746
RBM5
Tursiops truncatus
ENSTTRG00000007717
I
0.993
RBM5
Vicugna pacos
ENSVPAG00000009388
I
0.951
rbm5
Xenopus tropicalis
ENSXETG00000007303
I
0.810
Q6DDU9
Xenopus laevis
Q6DDU9
I
0.831