CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM18
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000008200
T39500_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000013028
RRM
27
99
LWIGNLDPKITEYHLLKLLQKFGKKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLV
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH81007
Xenopus laevis
AAH81007
N
0.762
Ame_R003783
Ailuropoda melanoleuca
Ame_R003783
N
0.812
RBM18_BOVIN
Bos taurus
ENSBTAG00000016367
N
0.800
RBM18
Canis familiaris
ENSCAFG00000020274
N
0.812
RBM18
Choloepus hoffmanni
ENSCHOG00000001341
N
0.811
LOC100393108
Callithrix jacchus
ENSCJAG00000020116
N
0.825
RBM18
Cavia porcellus
ENSCPOG00000013811
N
0.825
Rbm18
Dipodomys ordii
ENSDORG00000015862
N
0.825
LOC100067544
Equus caballus
ENSECAG00000024639
N
0.812
RBM18
Echinops telfairi
ENSETEG00000009832
N
0.825
RBM18
Felis catus
ENSFCAG00000011188
N
0.800
RBM18
Homo sapiens
ENSG00000119446
N
0.825
RBM18
Gallus gallus
ENSGALG00000001339
N
0.812
RBM18
Gorilla gorilla
ENSGGOG00000011052
N
0.825
RBM18
Loxodonta africana
ENSLAFG00000012134
N
0.825
RBM18
Macaca mulatta
ENSMMUG00000011455
N
0.825
RBM18
Monodelphis domestica
ENSMODG00000019688
N
0.811
Rbm18
Mus musculus
ENSMUSG00000026889
N
0.825
RBM18
Oryctolagus cuniculus
ENSOCUG00000008527
N
0.812
RBM18
Otolemur garnettii
ENSOGAG00000015104
N
0.825
RBM18
Ochotona princeps
ENSOPRG00000010381
N
0.825
RBM18
Procavia capensis
ENSPCAG00000011245
N
0.825
ENSPPYG00000019569
Pongo pygmaeus
ENSPPYG00000019569
N
0.825
RBM18
Pan troglodytes
ENSPTRG00000021323
N
0.825
RBM18
Pteropus vampyrus
ENSPVAG00000000863
N
0.812
Rbm18
Rattus norvegicus
ENSRNOG00000006763
N
0.812
RBM18
Sus scrofa
ENSSSCG00000005531
N
0.800
RBM18
Tupaia belangeri
ENSTBEG00000016520
N
0.811
RBM18
Taeniopygia guttata
ENSTGUG00000006802
N
0.811
RBM18
Vicugna pacos
ENSVPAG00000008618
N
0.812
rbm18
Xenopus tropicalis
ENSXETG00000016328
N
0.762
Q66J99
Xenopus laevis
Q66J99
N
0.762