CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKI67IP
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000007451
T39654_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000006445
RRM
47
117
IYVGHLPPTLYETQIQEYFSQFGTVTRFRLSRSKRTGNSRGYAFVEFESEDVAKIVADTMNNYLFGERLLV
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AT2G05160
Arabidopsis thaliana
AT2G05160-TAIR-G
N
0.000
cassava31399.valid.m1
Manihot esculenta
cassava31399.valid.m1
N
0.000
cassava31400.valid.m1
Manihot esculenta
cassava31400.valid.m1
N
0.000
cassava36931.valid.m1
Manihot esculenta
cassava36931.valid.m1
N
0.000
cassava7063.valid.m1
Manihot esculenta
cassava7063.valid.m1
N
0.000
Glyma14g01930.1
Glycine max
Glyma14g01930.1
N
0.000
Glyma18g09020.1
Glycine max
Glyma18g09020.1
N
0.000
GSVIVG00037782001
Vitis vinifera
GSVIVG00037782001
N
0.000
Medtr3g077080
Medicago truncatula
Medtr3g077080
N
0.000
Medtr5g102170
Medicago truncatula
Medtr5g102170
N
0.000
mgf003557m
Mimulus guttatus
mgf003557m
N
0.000
PK01281.1
Cannabis sativa
PK01281.1
N
0.000
PK20504.1
Cannabis sativa
PK20504.1
N
0.000
B9IAR9_POPTR
Populus trichocarpa
POPTR_0014s16340
N
0.000
ppa019338m
Prunus persica
ppa019338m
N
0.000