CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AKAP17A
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000024332
T39769_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000016627
RRM
168
194
CEEILRVVFESFGKIKNVDIPMLDPYR
ENSOCUP00000016627
RRM
206
239
SFGLQTFEAFIQYQESTDFLKAMESLRGMKLMLK
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AT3G12130
Arabidopsis thaliana
AT3G12130-TAIR-G
N
0.000
AT5G06770
Arabidopsis thaliana
AT5G06770-TAIR-G
N
0.000
XM_002884838.1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3001010
N
0.000
XM_002873232.1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000515
N
0.000
GSVIVG00001369001
Vitis vinifera
GSVIVG00001369001
N
0.000
GSVIVG00025360001
Vitis vinifera
GSVIVG00025360001
N
0.000
GSVIVG00033508001
Vitis vinifera
GSVIVG00033508001
N
0.000