CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBM23
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000014794
T39903_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000013253
RRM
173
241
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQQLLGVPI
ENSOGAP00000013253
RRM
270
293
LFVGSLHFNITEDMLRGIFEPFGK
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.774
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.765
RBM23
Dasypus novemcinctus
ENSDNOG00000002569
N
0.761
RBM23
Felis catus
ENSFCAG00000006632
N
0.752
RBM23
Homo sapiens
ENSG00000100461
N
0.771
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.724
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.771
Rbm39
Mus musculus
ENSMUSG00000027620
N
0.882
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.771
RBM23
Tarsius syrichta
ENSTSYG00000014755
N
0.791
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.761