RBM23 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000008482 T35550_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000015671 RRM 169 237
ENSCJAP00000015671 RRM 266 336
ENSCJAP00000015674 RRM 167 235
ENSCJAP00000015674 RRM 264 313
ENSCJAP00000015676 RRM 167 235
ENSCJAP00000015676 RRM 264 334
ENSCJAP00000015677 RRM 151 219
ENSCJAP00000015677 RRM 248 318
ENSCJAP00000015678 RRM 2 66
ENSCJAP00000015678 RRM 95 165

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC710066 Macaca mulatta ENSMMUG00000018381 N 0.992
RBM23 Homo sapiens ENSG00000100461 N 0.992
ENSPPYG00000005649 Pongo pygmaeus ENSPPYG00000005649 N 0.986
RBM23 Canis familiaris ENSCAFG00000011217 N 0.986
RBM23 Gorilla gorilla ENSGGOG00000015707 N 0.986
Ame_R014613 Ailuropoda melanoleuca Ame_R014613 N 0.986
LOC100052786 Equus caballus ENSECAG00000009910 N 0.986
RBM23 Tursiops truncatus ENSTTRG00000001500 N 0.986
RBM23 Pan troglodytes ENSPTRG00000006151 N 0.983
RBM23 Microcebus murinus ENSMICG00000006364 N 0.979
RBM23 Pteropus vampyrus ENSPVAG00000013785 N 0.979
ENSDORG00000004926 Dipodomys ordii ENSDORG00000004926 N 0.979
RBM23 Tarsius syrichta ENSTSYG00000014755 N 0.966
RBM23 Monodelphis domestica ENSMODG00000024448 N 0.964
Q0IIK8_BOVIN Bos taurus ENSBTAG00000038333 N 0.964
RBM23 Felis catus ENSFCAG00000006632 N 0.959
RBM23 Myotis lucifugus ENSMLUG00000012923 N 0.957
RBM23 Erinaceus europaeus ENSEEUG00000015560 N 0.957
RBM23 Oryctolagus cuniculus ENSOCUG00000002006 N 0.950
RBM23 Loxodonta africana ENSLAFG00000018567 N 0.950
RBM23 Choloepus hoffmanni ENSCHOG00000004460 N 0.950
RBM23 Sorex araneus ENSSARG00000005165 N 0.943
RBM23 Vicugna pacos ENSVPAG00000000599 N 0.941
RBM23 Ochotona princeps ENSOPRG00000001092 N 0.929
RBM23 Dasypus novemcinctus ENSDNOG00000002569 N 0.924
RBM23 Anolis carolinensis ENSACAG00000001569 N 0.921
rbm23 Xenopus tropicalis ENSXETG00000022623 N 0.907
AAH73374 Xenopus laevis AAH73374 N 0.886
RBM23 Macropus eugenii ENSMEUG00000014548 N 0.882
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.864
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.864
RBM23 Oryzias latipes ENSORLG00000010370 N 0.864
RBM39 Ochotona princeps ENSOPRG00000002183 N 0.864
RBM39 Homo sapiens ENSG00000131051 N 0.864
Rbm39 Mus musculus ENSMUSG00000027620 N 0.864
RBM39 Erinaceus europaeus ENSEEUG00000004390 N 0.864
RBM39 Vicugna pacos ENSVPAG00000003819 N 0.857
RBM23 Spermophilus tridecemlineatus ENSSTOG00000010354 N 0.821
RBM23 Echinops telfairi ENSETEG00000017915 N 0.783
RBM23 Otolemur garnettii ENSOGAG00000014794 N 0.765
BGIBMGA006208 Bombyx mori BGIBMGA006208 N 0.743