CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000006632
T37081_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000006163
RRM
169
237
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI
ENSFCAP00000006163
RRM
266
317
LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITLAGRAW
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM23
Homo sapiens
ENSG00000100461
N
0.959
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.959
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.959
RBM23
Tarsius syrichta
ENSTSYG00000014755
N
0.950
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.950
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.934
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.926
RBM23
Dasypus novemcinctus
ENSDNOG00000002569
N
0.909
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.868
RBM23
Canis familiaris
ENSCAFG00000011217
N
0.821
RBM23
Pteropus vampyrus
ENSPVAG00000013785
N
0.821
Ame_R014613
Ailuropoda melanoleuca
Ame_R014613
N
0.821
RBM23
Tursiops truncatus
ENSTTRG00000001500
N
0.821
ENSPPYG00000005649
Pongo pygmaeus
ENSPPYG00000005649
N
0.821
LOC100052786
Equus caballus
ENSECAG00000009910
N
0.821
RBM23
Gorilla gorilla
ENSGGOG00000015707
N
0.821
RBM23
Microcebus murinus
ENSMICG00000006364
N
0.814
ENSDORG00000004926
Dipodomys ordii
ENSDORG00000004926
N
0.814
RBM23
Erinaceus europaeus
ENSEEUG00000015560
N
0.807
RBM23
Sorex araneus
ENSSARG00000005165
N
0.807
Q0IIK8_BOVIN
Bos taurus
ENSBTAG00000038333
N
0.800
RBM23
Monodelphis domestica
ENSMODG00000024448
N
0.800
RBM23
Oryctolagus cuniculus
ENSOCUG00000002006
N
0.794
RBM23
Myotis lucifugus
ENSMLUG00000012923
N
0.793
RBM23
Loxodonta africana
ENSLAFG00000018567
N
0.786
RBM23
Ochotona princeps
ENSOPRG00000001092
N
0.773
RBM23
Anolis carolinensis
ENSACAG00000001569
N
0.771
RBM23
Echinops telfairi
ENSETEG00000017915
N
0.770
rbm23
Xenopus tropicalis
ENSXETG00000022623
N
0.764
RBM23
Otolemur garnettii
ENSOGAG00000014794
N
0.752
AAH73374
Xenopus laevis
AAH73374
N
0.750
RBM23
Takifugu rubripes
ENSTRUG00000011352
N
0.743
RBM23
Oryzias latipes
ENSORLG00000010370
N
0.743
Rbm39
Mus musculus
ENSMUSG00000027620
N
0.721
RBM39
Homo sapiens
ENSG00000131051
N
0.721
RBM39
Erinaceus europaeus
ENSEEUG00000004390
N
0.721
RBM39
Ochotona princeps
ENSOPRG00000002183
N
0.721
B0KWM7_CALJA
Callithrix jacchus
ENSCJAG00000017535
N
0.721
RBM39
Vicugna pacos
ENSVPAG00000003819
N
0.714