CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Tarsius syrichta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTSYG00000014755
T42522_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000013540
RRM
171
239
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI
ENSTSYP00000013540
RRM
268
313
LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFIT
Links
Other
RRM
family RBPs
Other
Tarsius syrichta
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.983
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.975
RBM23
Homo sapiens
ENSG00000100461
N
0.975
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.966
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.966
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.957
RBM23
Felis catus
ENSFCAG00000006632
N
0.950
RBM23
Dasypus novemcinctus
ENSDNOG00000002569
N
0.940
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.905
RBM23
Pteropus vampyrus
ENSPVAG00000013785
N
0.821
RBM23
Gorilla gorilla
ENSGGOG00000015707
N
0.821
RBM23
Tursiops truncatus
ENSTTRG00000001500
N
0.821
LOC100052786
Equus caballus
ENSECAG00000009910
N
0.821
ENSPPYG00000005649
Pongo pygmaeus
ENSPPYG00000005649
N
0.821
Ame_R014613
Ailuropoda melanoleuca
Ame_R014613
N
0.821
RBM23
Canis familiaris
ENSCAFG00000011217
N
0.821
ENSDORG00000004926
Dipodomys ordii
ENSDORG00000004926
N
0.814
RBM23
Microcebus murinus
ENSMICG00000006364
N
0.814
RBM23
Echinops telfairi
ENSETEG00000017915
N
0.810
RBM23
Erinaceus europaeus
ENSEEUG00000015560
N
0.807
RBM23
Monodelphis domestica
ENSMODG00000024448
N
0.800
RBM23
Sorex araneus
ENSSARG00000005165
N
0.800
Q0IIK8_BOVIN
Bos taurus
ENSBTAG00000038333
N
0.800
RBM23
Oryctolagus cuniculus
ENSOCUG00000002006
N
0.794
RBM23
Myotis lucifugus
ENSMLUG00000012923
N
0.793
RBM23
Otolemur garnettii
ENSOGAG00000014794
N
0.791
RBM23
Loxodonta africana
ENSLAFG00000018567
N
0.786
RBM23
Ochotona princeps
ENSOPRG00000001092
N
0.773
RBM23
Anolis carolinensis
ENSACAG00000001569
N
0.771
rbm23
Xenopus tropicalis
ENSXETG00000022623
N
0.764
AAH73374
Xenopus laevis
AAH73374
N
0.750
RBM23
Oryzias latipes
ENSORLG00000010370
N
0.736
RBM23
Takifugu rubripes
ENSTRUG00000011352
N
0.736
Rbm39
Mus musculus
ENSMUSG00000027620
N
0.730
RBM39
Homo sapiens
ENSG00000131051
N
0.721
B0KWM7_CALJA
Callithrix jacchus
ENSCJAG00000017535
N
0.721
RBM39
Erinaceus europaeus
ENSEEUG00000004390
N
0.721
RBM39
Ochotona princeps
ENSOPRG00000002183
N
0.721
RBM39
Vicugna pacos
ENSVPAG00000003819
N
0.714