A9PE96_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0002s19380 T45468_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s19380.1 RRM 82 152
POPTR_0002s19380.1 RRM 180 248
POPTR_0002s19380.2 RRM 82 152
POPTR_0002s19380.2 RRM 180 248

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30076.m004622 Ricinus communis 30076.m004622 N 0.779
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.714
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.714
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.721
GSVIVG00028149001 Vitis vinifera GSVIVG00028149001 N 0.714
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.702
ppa002369m Prunus persica ppa002369m N 0.729