ppa002369m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa002369m T58328_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa002369m RRM 84 153
ppa002369m RRM 175 243

Links

Other RRM family RBPs
Other Prunus persica RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.907
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.900
PK18808.1 Cannabis sativa PK18808.1 N 0.899
chr4.CM0333.80.nd Lotus japonicus chr4.CM0333.80.nd N 0.886
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.886
29889.m003323 Ricinus communis 29889.m003323 N 0.886
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.885
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.878
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.878
Medtr8g136920 Medicago truncatula Medtr8g136920 N 0.871
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.800
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.793
Sb02g014690 Sorghum bicolor Sb02g014690 N 0.770
GRMZM2G065276 Zea mays GRMZM2G065276 N 0.764
BGIOSIBCE029031 Oryza indica BGIOSIBCE029031 N 0.757
e_gw1.158.95.1 Physcomitrella patens e_gw1.158.95.1 N 0.757
FCA Oryza sativa LOC_Os09g03610 N 0.757
gw1.47.198.1 Physcomitrella patens gw1.47.198.1 N 0.755
MDP0000211002 Malus x domestica MDP0000211002 N 0.743
GSVIVG00028149001 Vitis vinifera GSVIVG00028149001 N 0.734
A9PE96_POPTR Populus trichocarpa POPTR_0002s19380 N 0.729
BRADI4G08727 Brachypodium distachyon BRADI4G08727 N 0.704